Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_B19
(883 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 66 4e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 63 4e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 62 5e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 60 3e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 60 4e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 55 8e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 55 8e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 54 1e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 7e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 3e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 6e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 1e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 44 2e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 33 0.005
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.019
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.13
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.17
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.92
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 66.1 bits (154), Expect = 4e-13
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Frame = +2
Query: 65 IASAAECENATSLSLTIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 223
I SA C D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 224 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 397
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 398 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
+ G V W + + + +P D QTC KFGS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 62.9 bits (146), Expect = 4e-12
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Frame = +2
Query: 83 CENATSLSLTIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 241
C D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 242 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 415
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 416 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHK**RNGFRDXQKNIQYVR 577
V W + + ++ +P D QTC KFGS + +GF+ ++I +R
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTY----DGFQVDLRHIDEIR 186
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 62.5 bits (145), Expect = 5e-12
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +2
Query: 89 NATSLSLTIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 256
N +++S +D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 257 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 427
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 428 KRLDISTPISMQLDNWPNDMQTCTFKFGS 514
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Frame = +2
Query: 116 DSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSWN 280
D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L W
Sbjct: 34 DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWE 93
Query: 281 AGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPI 454
E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 94 PKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSC 153
Query: 455 SMQLDNWPNDMQTCTFKFGS 514
+ ++ +P D QTC KFGS
Sbjct: 154 EIDVEYFPFDEQTCVLKFGS 173
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.1 bits (139), Expect = 3e-11
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Frame = +2
Query: 116 DSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLSWN 280
D LL+ Y+R P LT L L+ + + E +++ ++ W D +L WN
Sbjct: 39 DDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLKWN 98
Query: 281 AGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDIS 445
E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 99 PEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYK 155
Query: 446 TPISMQLDNWPNDMQTCTFKFGS 514
+ + ++ +P D Q+C KFGS
Sbjct: 156 SSCEINVEYFPFDEQSCIMKFGS 178
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 59.7 bits (138), Expect = 4e-11
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +2
Query: 161 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 334
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 335 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 502
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 503 KFGS 514
KFGS
Sbjct: 168 KFGS 171
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 59.3 bits (137), Expect = 5e-11
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Frame = +2
Query: 56 TCAIASAAECENATSLSLTIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 214
+C +A + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 215 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 388
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 389 ---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
+A + + G V W + + ++ +P D QTC KFGS
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Frame = +2
Query: 116 DSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSWN 280
D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L W
Sbjct: 34 DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWE 93
Query: 281 AGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDIS 445
E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 94 PKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYK 150
Query: 446 TPISMQLDNWPNDMQTCTFKFGS 514
+ S+ ++ +P D+QTC K GS
Sbjct: 151 SSCSIDVEFFPYDVQTCVLKLGS 173
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 200 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
G Y V++NGS ++ + + + +P D Q C KFGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 200 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
G Y V++NGS ++ + + + +P D Q C KFGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 200 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
G Y V++NGS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 200 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
G Y V+++GS ++ + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 200 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
G Y V+++GS ++ + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 200 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 55.2 bits (127), Expect = 8e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 200 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 55.2 bits (127), Expect = 8e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 200 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 54.4 bits (125), Expect = 1e-09
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +2
Query: 242 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 415
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 416 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
++ + + + +P D Q C KFGS
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +2
Query: 164 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 340
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 341 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 52.4 bits (120), Expect = 5e-09
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Frame = +2
Query: 122 LLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGE 289
L YD P S +I N+T+ L + + S + + + + + W D LSW +
Sbjct: 51 LFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSD 110
Query: 290 W-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPIS 457
+ G + V S+ +W PD+ + N+ T G V ++GSVS + + +
Sbjct: 111 FDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCA 170
Query: 458 MQLDNWPNDMQTCTFKFGSRMH 523
+WP D C FGS +H
Sbjct: 171 TDFSSWPYDTHRCRINFGSWVH 192
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 52.0 bits (119), Expect = 7e-09
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +2
Query: 98 SLSLTIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 262
++++ +++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 263 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 433
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 434 LDISTPISMQLDNWPNDMQTCTFKFGS 514
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 51.6 bits (118), Expect = 9e-09
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Frame = +2
Query: 122 LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 292
L YDR+ P+ K ++ L ++H N+ E TV L++ W L+W + E+
Sbjct: 44 LFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFD 103
Query: 293 GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQL 466
++ V S +W PD+V+ + + ++ V N+G++ + TP+ +
Sbjct: 104 SINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEY 161
Query: 467 DN--WPNDMQTCTFKFGSRMH 523
D+ WP D+ CT S H
Sbjct: 162 DHTWWPYDILNCTIHIASWSH 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 3e-07
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 12/146 (8%)
Frame = +2
Query: 113 IDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRL 271
+D++L YD E+ D +V + L +R A I + + + + W+D+RL
Sbjct: 36 LDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERL 95
Query: 272 SWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRL 436
+N G T L + R+W PD+ N + + R+ NGSV + R+
Sbjct: 96 RFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRI 154
Query: 437 DISTPISMQLDNWPNDMQTCTFKFGS 514
++ M L +P D Q C+ + S
Sbjct: 155 SLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.6 bits (103), Expect = 6e-07
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 89 NATSLSLTIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 256
N ++S +DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 257 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 409
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 410 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-06
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 89 NATSLSLTIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 256
N ++S +DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 257 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 409
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 410 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 44.0 bits (99), Expect = 2e-06
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 7/146 (4%)
Frame = +2
Query: 98 SLSLTIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDK 265
+++ TI +L YD P+ ++V + L + + I E I L W D+
Sbjct: 36 NVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDE 95
Query: 266 RLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRL 436
RL+++ E + +E++W PD N + D R R+S +GSV++ R
Sbjct: 96 RLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRF 155
Query: 437 DISTPISMQLDNWPNDMQTCTFKFGS 514
+ M L +P D Q CT + S
Sbjct: 156 TTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 2e-06
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Frame = +2
Query: 113 IDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRL 271
+D++L YD E+ D VV + + +R + I + + + W+D+RL
Sbjct: 36 LDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERL 95
Query: 272 SWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRL 436
+N G T L + R+W PD+ N + + R+ NGSV + R+
Sbjct: 96 RFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRI 154
Query: 437 DISTPISMQLDNWPNDMQTCTFKFGS 514
++ M L +P D Q C+ + S
Sbjct: 155 SLTLSCPMNLKLYPLDRQVCSLRMAS 180
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 254 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 406
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 407 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.001
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +2
Query: 86 ENATSLSLTIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 250
E+ S +D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 251 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 421
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 422 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.7 bits (76), Expect = 0.001
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +2
Query: 86 ENATSLSLTIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 250
E+ S +D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 251 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 421
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 422 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.7 bits (76), Expect = 0.001
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +2
Query: 86 ENATSLSLTIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 250
E+ S +D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 251 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 421
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 422 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 514
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 32.7 bits (71), Expect = 0.005
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = +2
Query: 212 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 379
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 380 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMH 523
++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSH 155
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 0.019
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 164 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 337
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 338 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 511
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 512 S 514
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.13
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +2
Query: 164 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 325
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 326 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 490
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 491 TC 496
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.5 bits (58), Expect = 0.17
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 320 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 490
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 491 TCTFKFGSRMH 523
C + S H
Sbjct: 176 ECKLQMESLSH 186
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.0 bits (52), Expect = 0.92
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 210 SRMLACLKCRVRLTTILESGGDSRSYVARSESIVRDSDV 94
+RMLA L RL+ + SGG RSES+V D+
Sbjct: 21 ARMLALLVSLHRLS--IYSGGSDWRVAGRSESVVIPGDI 57
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 476 PNDMQTCTFKFGSRMHK**RNGFRDXQKNIQYVR 577
P D++ FK+G H RN ++ KN++Y R
Sbjct: 655 PQDIENI-FKYGYVSHANQRNMYKLDLKNMKYTR 687
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 307 PSAAAPFPCVPTQS 266
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,857
Number of Sequences: 438
Number of extensions: 5751
Number of successful extensions: 95
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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