Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_B13
         (837 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1324 + 32659752-32661972,32662067-32662761                       34   0.16 
05_03_0035 - 7592177-7592938                                           32   0.49 
05_03_0033 - 7585267-7586028                                           32   0.49 
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582...    31   1.1  
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686...    30   2.6  
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229     30   2.6  
09_03_0099 + 12353777-12353877,12354022-12354220,12354720-123548...    29   6.1  

>04_04_1324 + 32659752-32661972,32662067-32662761
          Length = 971

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = +3

Query: 219 EHLDRETKQDPADSPVH--HHRVATQSFLEM-ERGPAAEHRPPSVAEKLMDHMADKFTDS 389
           EH       + AD+ VH   HR  + S  E     P+ EHR  SV+       A   TDS
Sbjct: 396 EHRQLSMSLNDADTEVHGGEHRRLSMSLNEAGTEQPSGEHRQLSVSSS----DAGSSTDS 451

Query: 390 ESDADTAGESP 422
            SD+DT G  P
Sbjct: 452 TSDSDTPGGDP 462


>05_03_0035 - 7592177-7592938
          Length = 253

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 19/72 (26%), Positives = 30/72 (41%)
 Frame = +3

Query: 234 ETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMADKFTDSESDADTAG 413
           E   +P   P       + S+ + + GP  E +P   A       +   T SES  ++  
Sbjct: 52  EKSSEPEAKPASQQEPKSDSYSQAKPGPKDEPKPEPEAMSASQPESKPATYSESKPESKA 111

Query: 414 ESPLHRPEPRVE 449
           E P  +PEP+ E
Sbjct: 112 E-PESKPEPKAE 122


>05_03_0033 - 7585267-7586028
          Length = 253

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 19/72 (26%), Positives = 30/72 (41%)
 Frame = +3

Query: 234 ETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMADKFTDSESDADTAG 413
           E   +P   P       + S+ + + GP  E +P   A       +   T SES  ++  
Sbjct: 52  EKSSEPEAKPASQQEPKSDSYSQAKPGPKDEPKPEPEAMSASQPESKPATYSESKPESKA 111

Query: 414 ESPLHRPEPRVE 449
           E P  +PEP+ E
Sbjct: 112 E-PESKPEPKAE 122


>02_01_0782 +
           5827364-5827441,5827733-5827787,5828761-5828849,
           5829167-5829191,5829645-5829683,5830316-5830433,
           5830857-5831023,5831155-5831518,5831589-5831701,
           5832185-5832310,5832436-5833339,5833694-5834036
          Length = 806

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 531 RARGPAPVSGRELQASVVPVSER*ASGVRPSARADGGATLLQY 403
           R+R P P+  R   AS+ P  E  A    PSA ++G   L+ Y
Sbjct: 754 RSRSPPPIHNRSPLASLSPKRESNAKSRSPSASSEGKKGLVSY 796


>09_06_0317 -
           22265786-22267618,22267874-22268446,22268546-22268677,
           22268931-22269137,22269287-22269388,22270742-22271032
          Length = 1045

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -2

Query: 380 KFVGHVVHKLFGDGRRSMFRCGPTFHLQETLSGH 279
           K+  HV+  LF D       CG  F L+E LS H
Sbjct: 879 KYHAHVISTLFDDQSHQCNTCGLRFSLEEELSVH 912


>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
          Length = 841

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 1   YWTTPRRDSAGLTRSSHPRTRVCTAP 78
           YWT  R    GLT S HP T   + P
Sbjct: 73  YWTVQRHGGQGLTNSRHPPTTPLSPP 98


>09_03_0099 +
           12353777-12353877,12354022-12354220,12354720-12354845,
           12354935-12355093,12356286-12356415,12356551-12356592,
           12357507-12357806,12357933-12357984,12358157-12358234,
           12359133-12359229
          Length = 427

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +3

Query: 234 ETKQDP-ADSPVHHHRVATQSFLEMERGPAAEH-RPPSVAEKLMDHMADKFTDSESDADT 407
           E ++D  ADSP       T S L+ME GP+A H    +   K  D   D F D +   D 
Sbjct: 267 EAEEDMFADSPKDK---TTASLLDMEPGPSAAHTSTTTTTSKEDDSDFDMFGDDDDKTDV 323

Query: 408 AGES 419
             +S
Sbjct: 324 KRDS 327


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,282,065
Number of Sequences: 37544
Number of extensions: 439057
Number of successful extensions: 1800
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1799
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)