Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_B08
         (881 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensit...    29   8.5  
AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p pro...    29   8.5  
AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB...    29   8.5  
AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA...    29   8.5  
AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA...    29   8.5  

>U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 622

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 439 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 335
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 439 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 335
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB,
            isoform B protein.
          Length = 3966

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 859  FXGXQSNAWRFWXAMIGRADIEGSKSNV 776
            F   Q  AWR+W  +  R D+E +K+ V
Sbjct: 1858 FLYKQRGAWRYWPDLAKRMDVEETKTGV 1885


>AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA,
            isoform A protein.
          Length = 3868

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 859  FXGXQSNAWRFWXAMIGRADIEGSKSNV 776
            F   Q  AWR+W  +  R D+E +K+ V
Sbjct: 1858 FLYKQRGAWRYWPDLAKRMDVEETKTGV 1885


>AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 439 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 335
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,667,260
Number of Sequences: 53049
Number of extensions: 848214
Number of successful extensions: 2425
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)