Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_A15
(897 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 55 8e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 49 5e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 6e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 42 8e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 1e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 41 2e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 36 4e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 35 9e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 33 0.005
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.94
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 24 1.6
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 8.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 8.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 8.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 8.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.7
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 55.2 bits (127), Expect = 8e-10
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Frame = +2
Query: 134 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 292
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 293 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSEHLWRPDVVLLNAAATTAGDYAL-RAR 466
+ L+ W D + W+ E+G T L V SEH+W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 467 VSNNGSVSW 493
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 543 WPNDMQTCTFKFGS 584
+P D QTC KFGS
Sbjct: 152 FPFDQQTCFMKFGS 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 50.8 bits (116), Expect = 2e-08
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Frame = +2
Query: 152 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 310
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 311 LQMNWIDKRLSWNAGEWGCSTWL-VSSEHLWRPDVVLL-NAAATTAGDYALRARVSNNGS 484
++ +W D +L W+ E+G L V S+H+WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 485 VSW 493
V W
Sbjct: 137 VEW 139
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 534 LDNWPNDMQTCTFKFGS 584
++ +P D QTC KFGS
Sbjct: 153 VEYFPFDEQTCVMKFGS 169
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.8 bits (116), Expect = 2e-08
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Frame = +2
Query: 122 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 280
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 281 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSEHLWRPDVVLLNAAATTAGDYAL 457
T + ++ W D +L WN ++G T V SEH+W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 458 ----RARVSNNGSVSW 493
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 534 LDNWPNDMQTCTFKFGS 584
++ +P D QTC KFGS
Sbjct: 149 VEYFPFDEQTCFMKFGS 165
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 49.2 bits (112), Expect = 5e-08
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Frame = +2
Query: 179 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 343
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 344 WNAGEWGCSTWL-VSSEHLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 493
W E+G L V S+H+WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 534 LDNWPNDMQTCTFKFGS 584
++ +P D QTC KFGS
Sbjct: 157 VEYFPFDEQTCVLKFGS 173
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Frame = +2
Query: 179 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 343
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 344 WNAGEWGCSTWL-VSSEHLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 493
WN E+G L V SE++W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 22.2 bits (45), Expect = 6.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 534 LDNWPNDMQTCTFKFGS 584
++ +P D Q+C KFGS
Sbjct: 162 VEYFPFDEQSCIMKFGS 178
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.4 bits (105), Expect = 4e-07
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +2
Query: 179 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 343
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 344 WNAGEW-GCSTWLVSSEHLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 496
WN E+ G ++ LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.4 bits (105), Expect = 4e-07
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +2
Query: 179 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 343
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 344 WNAGEW-GCSTWLVSSEHLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 496
WN E+ G ++ LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 4e-07
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Frame = +2
Query: 179 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 343
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 344 WNAGEWGCSTWL-VSSEHLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 493
W E+G L V S+H+WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 525 SMXLDNWPNDMQTCTFKFGS 584
S+ ++ +P D+QTC K GS
Sbjct: 154 SIDVEFFPYDVQTCVLKLGS 173
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSEHLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSVSWI 496
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 8e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 152 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 316
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 317 MNWIDKRLSWNAGEW-GCSTWLVSSEHLWRPDVVL 418
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSEHLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSVSWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSEHLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSVSWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSEHLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSVSWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSEHLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSVSWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSEHLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSVSWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 42.3 bits (95), Expect = 6e-06
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Frame = +2
Query: 131 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 295
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 296 RILADLQMNWIDKRLSWNAGEWGCSTWLVSSEH-LWRPDVVLLNAA-ATTAGDYALRARV 469
L++ W D + WN ++G L H LW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 470 SNNGSVSWI 496
NNG+ ++
Sbjct: 131 KNNGTCLYV 139
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 41.9 bits (94), Expect = 8e-06
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 230 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSEHLWR 403
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + + +W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 404 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 496
PD+VL N A G+Y +R + + NG V W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 543 WPNDMQTCTFKFGS 584
+P D QTC KFGS
Sbjct: 158 FPFDQQTCIMKFGS 171
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +2
Query: 233 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSEHLWRPD 409
+V L+LH ++ E + + W D L WNA E+ G V +WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 410 VVLLNAAATTAGDYALRAR--VSNNGSVSWI 496
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 40.7 bits (91), Expect = 2e-05
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 158 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 325
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 326 IDKRLSWNAGEWGCSTWLVSSEHLWRPDVVLLN 424
+D+RL++ G+ + + +W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 498 SAWTLALQFSMXLDNWPNDMQTCTFKFGS 584
S T+ M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.1 bits (82), Expect = 2e-04
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Frame = +2
Query: 155 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 322
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 323 WIDKRLSWNAGEW-GCSTWLVSSEHLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 490
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 491 WI 496
+
Sbjct: 159 CV 160
Score = 22.2 bits (45), Expect = 6.6
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +3
Query: 540 NWPNDMQTCTFKFGS 584
+WP D C FGS
Sbjct: 175 SWPYDTHRCRINFGS 189
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.3 bits (80), Expect = 4e-04
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Frame = +2
Query: 158 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 325
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 326 IDKRLSWNAGEWGCSTWLVSSE---HLWRPDVVLLNA------AATTAGDYALRARVSNN 478
D RL++ G T V SE ++W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 479 GSVSWIKRLDISTPIFYAVRQLAQRHADLHVQVRF*GCTI 598
GS++ RL I+ ++ H+++ G T+
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 163
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.1 bits (77), Expect = 9e-04
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Frame = +2
Query: 158 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 325
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 326 IDKRLSWNAGEWGCSTWLVSSE---HLWRPDVVLLNA------AATTAGDYALRARVSNN 478
D RL++ G T V SE ++W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 479 GSVSWIKRLDISTPIFYAVRQLAQRHADLHVQVRF*GCTI 598
GS++ RL I+ ++ H+++ G T+
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTM 163
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.005
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Frame = +2
Query: 167 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 331
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 332 KRLSWNAGEWGCSTWLVSSEHLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 502
RLS+ S + E +WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 503 LDI 511
L I
Sbjct: 156 LTI 158
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 507 TLALQFSMXLDNWPNDMQTCTFKFGS 584
T+ + M L N+P D Q+C GS
Sbjct: 157 TIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.94
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 98 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 202
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 498 SAWTLALQFSMXLDNWPNDMQTCTFKFGS 584
S TL L +M +++P+D Q C+ S
Sbjct: 124 SKLTLVLSCAMKFESYPHDTQICSMMIES 152
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 8.7
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +1
Query: 685 PVRGQTPXPXXXGGXPPLGXXPXXXSXXXXPRXTPLG 795
PV P P G PP P PR +G
Sbjct: 112 PVPVPVPVPVYYGNFPPRSMGPWISIQEQIPRFRHIG 148
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 8.7
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +1
Query: 685 PVRGQTPXPXXXGGXPPLGXXPXXXSXXXXPRXTPLG 795
PV P P G PP P PR +G
Sbjct: 112 PVPVPVPVPVYYGNFPPRSMGPWISIQEQIPRFRHIG 148
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 8.7
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +1
Query: 685 PVRGQTPXPXXXGGXPPLGXXPXXXSXXXXPRXTPLG 795
PV P P G PP P PR +G
Sbjct: 112 PVPVPVPVPVYYGNFPPRSMGPWISIQEQIPRFRHIG 148
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 8.7
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +1
Query: 685 PVRGQTPXPXXXGGXPPLGXXPXXXSXXXXPRXTPLG 795
PV P P G PP P PR +G
Sbjct: 345 PVPVPVPVPVYYGNFPPRSMGPWISIQEQIPRFRHIG 381
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 376 PSAAAPFPCVPTQS 335
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,285
Number of Sequences: 438
Number of extensions: 5303
Number of successful extensions: 75
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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