Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_A13
(847 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 9e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 48 1e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 45 8e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 4e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 43 4e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 5e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 9e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 7e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 36 4e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 5e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 36 6e-04
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 28 0.094
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.12
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 2.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.2
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 51.6 bits (118), Expect = 9e-09
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
+++W+PD+VL N A G+Y +R + + N V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 499 QTCTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGAWDVTG-SVQCGAXPGPWRGGTX 660
QTC KFGS N D++ + +K + ++SG WD+ G + T
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINVPAYLNTYKGDFPTETD 222
Query: 661 VAMFQMSFRKT 693
+ + + RKT
Sbjct: 223 ITFYIIIRRKT 233
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 47.6 bits (108), Expect = 1e-07
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
+ RLW+PDV++ N+A G Y V NN + ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 499 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTG 612
Q C KFGS ++ ++D + I S +G WD+ G
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDLLG 201
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.0 bits (104), Expect = 4e-07
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPN 492
V S+ +W PD+ + N+ T G V ++ SVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 493 DMQTCTFKFGSRMHNSDEMDFVIDKRIYSM 582
D C FGS +H+ +E++ +DK+ + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.2 bits (102), Expect = 8e-07
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
V S+ +WRPD+VL N A A +A + + V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 499 QTCTFKFGSRMHNSDEMD 552
QTC KFGS ++ ++D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 45.2 bits (102), Expect = 8e-07
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
V S+ +WRPD+VL N A A +A ++ V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 499 QTCTFKFGSRMHNSDEMD 552
QTC KFGS ++ ++D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNVSVSWIKRLDISTPISM 471
G V SE +W PD+VL N A G+Y + +A + VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 472 QLDNWPNDMQTCTFKFGSRMHNSDEMD 552
++ +P D Q+C KFGS +N ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
++ +LW+PD+++ N+A G Y V++N S ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 499 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTG 612
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 232
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWINKRLSWNAGGVG 305
++ E + A L++ W++ L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
++ +LW+PD+++ N+A G Y V++N S ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 499 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTG 612
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 232
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWINKRLSWNAGGVG 305
++ E + A L++ W++ L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
++ +LW+PD+++ N+A G Y V++N S ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 499 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTG 612
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWINKRLSWNAGGVG 305
++ E + A L++ W++ L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 42.7 bits (96), Expect = 4e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
++ +LW+PD+++ N+A G Y V+++ S ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 499 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTG 612
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWINKRLSWNAGGVG 305
++ E + A L++ W++ L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.7 bits (96), Expect = 4e-06
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNVSVSWIKRLDISTPISMQLDNWP 489
V S+ +WRPD+VL N A G+Y + +A V + V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 490 NDMQTCTFKFGSRMHNSDEMD 552
D+QTC K GS ++ ++D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 42.7 bits (96), Expect = 4e-06
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 298 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNVSVSWIKRLDISTPISM 471
E+G T L V SE +W PD+VL N A G + +A + V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 472 QLDNWPNDMQTCTFKFGSRMHNSDEMD 552
+ +P D QTC KFGS ++ ++D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
++ +LW+PD+++ N+A G Y V+++ S ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 499 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTG 612
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWINKRLSWNAGGVG 305
++ E + A L++ W++ L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.5 bits (93), Expect = 9e-06
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
++ +LW+PD+++ N+A G Y V+++ S ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 499 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTG 612
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWINKRLSWNAGGVG 305
++ E + A L++ W++ L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
++ +LW+PD+++ N+A G Y V+++ S ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 499 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTG 612
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWINKRLSWNAGGVG 305
++ E + A L++ W++ L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDM 498
++ +LW+PD+++ N+A G Y V+++ S ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 499 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTG 612
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWINKRLSWNAGGVG 305
++ E + A L++ W++ L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.9 bits (89), Expect = 3e-05
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNVSVSWIKRLDISTPISM 471
G T V SE +W PD+VL N A G+Y + +A + + V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 472 QLDNWPNDMQTCTFKFGSRMHNSDEMD 552
++ +P D QTC KFGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 38.7 bits (86), Expect = 7e-05
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNVSVSWIKRLDISTPISMQLDNWPNDMQ 501
ER+WRPD N + + R+S + + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 502 TCTFKFGS 525
+C GS
Sbjct: 175 SCPLILGS 182
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.7 bits (81), Expect = 3e-04
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +1
Query: 337 LWRPDVVLLNAAATTAGDYALRAR---VSNNVSVSWIKRLDISTPISMQLDNWPNDMQTC 507
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 508 TFKFGSRMHNSDEMDFV 558
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +1
Query: 334 RLWRPDVVLLNAAAT---TAGDYALRARVSNNVSVSWIKRLDISTPISMQLDNWPNDMQT 504
R+W+PD N + T R+ + V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 505 CTFKFGS 525
C +FGS
Sbjct: 144 CPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 93 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 257
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 258 MNWINKRLSWNA 293
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 27.9 bits (59), Expect = 0.12
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNVSVSWIKRLDISTPISMQLDN--W 486
V S +W PD+V+ ++ + D ++ V N+ ++ + TP+ + D+ W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 487 PNDMQTCTFKFGSRMHNSDEM 549
P D+ CT S H S+E+
Sbjct: 167 PYDILNCTIHIASWSHGSNEI 187
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNVSVSWIKRLDISTPISMQLDNWPNDMQ 501
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 502 TCTFKFGSRMHNSDEMDFVID 564
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNVSVSWIKRLDISTPISMQLDNWPND 495
V R+WRPD +L N A + VS+ V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 496 MQTCTFKFGSRMHNSDEMD 552
Q C K+ S ++ +++
Sbjct: 142 EQRCVLKWASWTYDGYQLE 160
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 28.3 bits (60), Expect = 0.094
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 337 LWRPDVVLLNAAATT-AGDYALRARVSNNVS--VSWIKRLDISTPISMQLDNWPNDMQTC 507
+W P V + N ++ G+ VS + S V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 508 TFKFGSRMHNSDEM 549
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.12
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NVSVSWIKRLDISTPISMQLDNWPND 495
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 496 MQTCTFKFGSRMHNSDEM 549
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.4 bits (48), Expect = 2.7
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 171 KIVVNLTLHLRHANIRESESTVRIQADLQMNWINKRLSWNAGGVGLQHLAGVL----GTL 338
+ ++N L + + + ++ + D + N ++ + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 339 V 341
+
Sbjct: 299 I 299
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 116 GQ*CCVFAFCRTSYSTSEEKXVTE 45
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,651
Number of Sequences: 438
Number of extensions: 5059
Number of successful extensions: 63
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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