Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_P14
(794 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0324 - 2428035-2428514 34 0.15
05_06_0281 + 26912419-26913099 33 0.20
11_07_0002 - 27171791-27172222 32 0.60
09_02_0279 + 6702517-6702948 32 0.60
02_02_0063 + 6481568-6481570,6481922-6482470 31 1.1
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 30 2.4
11_06_0610 - 25449085-25453284 29 3.2
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 29 3.2
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 29 3.2
07_03_0315 - 16674660-16674712,16674966-16675158 29 3.2
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 29 3.2
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 4.3
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 4.3
07_03_0369 - 17356806-17356934,17357145-17357278,17357989-173582... 29 4.3
04_04_1019 + 30166514-30166585,30167207-30167841,30168505-301686... 29 4.3
01_06_0752 + 31704071-31704787 29 4.3
12_02_0635 - 21430245-21431156 29 5.6
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 5.6
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 28 7.4
02_01_0289 - 1937125-1937385,1937570-1937611 28 7.4
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 26 8.5
10_01_0144 - 1705429-1706250 28 9.8
08_01_1025 + 10361064-10361237,10361807-10361877,10362001-103622... 28 9.8
05_06_0282 + 26915249-26915881 28 9.8
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 28 9.8
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 28 9.8
04_04_0534 + 26071227-26071811 28 9.8
03_03_0164 - 14979364-14979479,14979613-14980102 28 9.8
01_01_0085 - 639959-640192,640290-640379,640465-640521,640826-64... 28 9.8
>11_01_0324 - 2428035-2428514
Length = 159
Score = 33.9 bits (74), Expect = 0.15
Identities = 33/106 (31%), Positives = 39/106 (36%)
Frame = +3
Query: 240 RRRGSPQGRPADRAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGSGRDTP 419
RRRG P RR G LG A RRAA L+ +T L + P +
Sbjct: 4 RRRGDDNTSPLSLPSCPRRRRPRAGDLGAAHRRAAPPPLLLRLSTLLAISDPQRLVAEDD 63
Query: 420 STGHSNHSTGGALECW*RAARPHPLRSPLDLHRGGGRHLQGPGRTG 557
H TG + C R H LR R GR +G R G
Sbjct: 64 GRQHWKGYTGAGM-CRHRCTEGHHLRYRC-CFRSDGRWRKGDDRGG 107
>05_06_0281 + 26912419-26913099
Length = 226
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 235 QPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRD 408
+P G P + P P+ ++ +R+P GP W PG+P T+T L G D
Sbjct: 82 RPVGPTPPPPSHPVVPTPTQLAADDDGGLLRRPGGPTPPSPWHPGVP--TQTQLAGGD 137
>11_07_0002 - 27171791-27172222
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 426 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 304
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 426 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 304
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1
Query: 428 TGRRCIASRPGRLVLVQRGIPGHQRHRLGGPTG 330
TGRR A+RPGRLV + + G +R GP G
Sbjct: 131 TGRRDAATRPGRLVAMAATV-GSRREERRGPAG 162
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 29.9 bits (64), Expect = 2.4
Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
Frame = +1
Query: 142 LNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVS 321
+ND A H D + G+ PD QP A P+D QP PS + TS
Sbjct: 179 INDLDAGRH---DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPSS--SPATTSPAH 233
Query: 322 VRQPVGPPRRCRWCPGIPRW-TRTSLPGRDAIHRRPV 429
R+ G P P W + LP R R P+
Sbjct: 234 PRRAHGQVLLGSH-PRGPHWRVQGHLPQRQGPRRVPI 269
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 172 TSDPLRGQNPDEVGGLPRSTLQ-PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPR 348
T P + P+E P S + P AHP P+E S E+S + + PP
Sbjct: 767 TPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPS 826
Query: 349 RCRWCPGIPRWTRTSLPGRDA 411
P P ++S P +A
Sbjct: 827 GHEGTPPSP--VKSSSPPPEA 845
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +3
Query: 480 RPHPLRSPLDLHRGGGRHLQGPGRTGVFPPPAPGSTATDRCGKGR 614
R HP R P D H GGG + G G G + PGS R G GR
Sbjct: 70 RFHPYRGPSD-HSGGGGYRSGGG--GEY--GEPGSGPRHRYGSGR 109
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 182 GSDVGC-KSAEESFSGWALKSLGPRSAHNTMQIVEXHI 72
G D G K A+++ GW+L SL P H+ E H+
Sbjct: 116 GRDGGIGKCADDAVPGWSLASLKPSYYHHVFSKAEFHV 153
>07_03_0315 - 16674660-16674712,16674966-16675158
Length = 81
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 428 TGRRCIASRPGRLVLVQRGIPGHQRHRLGGPTGCRTETADVSEPSIRLEGSVG 270
TG + + S GR +L I +R R+G P GC+ + S I L VG
Sbjct: 11 TGEKGVRSGVGRDILRDEKIK--ERKRMGQPAGCQADLLICSPVKINLFSQVG 61
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 316 VSVRQPVGPPRRCRWCPGIPRWTR 387
+ + + V PP R WCP RW R
Sbjct: 1 MEIARVVAPPLRLAWCPASRRWGR 24
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 396 QAGSGPAGYSGTPAAPSGRPDGLPYRDG 313
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 173 RPIPSEVRTRMR*GGYRGQHYNQTARLTPR 262
R PSE+R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>07_03_0369 -
17356806-17356934,17357145-17357278,17357989-17358247,
17358322-17358410,17358644-17358794,17358889-17359032,
17359358-17359477,17359595-17359769,17359842-17360215
Length = 524
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 133 AHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAA---HPKDAQPTEPSRRIEGS 303
A P + S L PT+ L P G LPRS A HP+DA P+ PS R +G
Sbjct: 26 ASPEDGSPFLRLPTASDL----PVPAGQLPRSAAVGLIRALNLHPRDASPS-PSSRGDGD 80
Query: 304 ETSAVSVRQPV 336
+ V +P+
Sbjct: 81 VPAGTLVERPI 91
>04_04_1019 +
30166514-30166585,30167207-30167841,30168505-30168645,
30169604-30170300
Length = 514
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 537 QGPGRTGVFPPPAPGSTATDRCGKGRA 617
Q P +FPPP S+ TD CG G A
Sbjct: 62 QLPAEPMLFPPPPSLSSTTDGCGAGGA 88
>01_06_0752 + 31704071-31704787
Length = 238
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 549 RTGVFPPPAPGSTATDRC 602
R GV PPP P STA RC
Sbjct: 159 RAGVEPPPPPPSTAAARC 176
>12_02_0635 - 21430245-21431156
Length = 303
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Frame = +1
Query: 172 TSDPLRGQNPDEVGGLPRSTLQPDGA----AHPKDA---QPTEPSRRIEGSETSAVSV-- 324
T P R ++P G PR+ P G+ A P QP P+ E E V V
Sbjct: 208 TPPPERRESPSPPRGRPRTPPPPPGSPKKPATPGAVVVEQPGPPTDHREAGELVMVDVVV 267
Query: 325 RQPVGPPRRCRWCP 366
R P PPR CP
Sbjct: 268 RPPTTPPRPYVGCP 281
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 171 DVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADRAFEA 290
D + P EP + +A T RR GSP PA A +A
Sbjct: 135 DAAADPAKEPSGSKAGSAAATGGRRTGSPPPSPAPVAKDA 174
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 255 PQGRPADRAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGS 404
P+ A ++ +NRR NVG + V V R+TP+D P G+
Sbjct: 537 PRPGSASQSSRSNRR--NVGSNEDTESECGRLVGTVRRHTPIDTRDPIGA 584
>02_01_0289 - 1937125-1937385,1937570-1937611
Length = 100
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 138 PTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPA 272
PT LC + PD SP R P G G + RR G G A
Sbjct: 36 PTSGSLCAMLPDSCSPHR--PQLGVGCRQIGVRRRRTGGMNGSGA 78
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 25.8 bits (54), Expect(2) = 8.5
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +3
Query: 93 HGVVSRPRA-QGF*SPPTKRLLCTLTPDV-----RSPPRSEPG*GRGATAVNTTTRRRGS 254
HG +S PR+ +P +R +TP V RSP P RG A + + RG
Sbjct: 50 HGALSAPRSGDEEITPWWRRSPSAVTPPVYPHVERSP---SPPIARGWPADDDERQERGE 106
Query: 255 PQGRPA 272
P G PA
Sbjct: 107 PSGSPA 112
Score = 20.6 bits (41), Expect(2) = 8.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 345 QTVPLVSRNTPLDQNQPA 398
Q P V ++TPL +PA
Sbjct: 153 QPAPHVEQSTPLPAKEPA 170
>10_01_0144 - 1705429-1706250
Length = 273
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 537 QGPGRTGVFPPPAPGSTATD-RCGKGRALPSLAPXXXXAR 653
QG R G+ PPP P D + +GR +AP AR
Sbjct: 55 QGRRRWGLLPPPTPDGWGPDGKQAEGRRRVEVAPAPPTAR 94
>08_01_1025 +
10361064-10361237,10361807-10361877,10362001-10362235,
10362317-10362520
Length = 227
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +1
Query: 130 RAHPLNDSSALLHPTSDP---LRG-QNPDEVGGLPRSTLQPDGAAHPKDAQ 270
RA P+ D + P+S+ L G Q P VG + R ++ D AA P DA+
Sbjct: 147 RASPVIDLNEACEPSSEEMEELHGYQEPVRVGRVMRYPMEGDFAAGPSDAK 197
>05_06_0282 + 26915249-26915881
Length = 210
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 480 RPHPLRSPLDLHRGGGRHLQGPGRTGVFPPPAPG 581
RPH +PL GGG + PGR PPP PG
Sbjct: 65 RPHGRVTPLADGGGGGVLRRPPGRGP--PPPGPG 96
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 519 GGGRHLQGPGRTGVFPPPAPGS 584
G HLQ P R + P PAPG+
Sbjct: 102 GAATHLQQPSRMKLSPSPAPGA 123
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 519 GGGRHLQGPGRTGVFPPPAPGS 584
G HLQ P R + P PAPG+
Sbjct: 102 GAATHLQQPSRMKLSPSPAPGA 123
>04_04_0534 + 26071227-26071811
Length = 194
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 363 TPAAPSGRPDGLPYRDGRRFRAFDSPRRLCRLGV 262
T + P G P G+P DG P RLC G+
Sbjct: 125 TASKPDGYPSGMPVPDGHEHGYGVLPDRLCGRGL 158
>03_03_0164 - 14979364-14979479,14979613-14980102
Length = 201
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 187 RGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIE-GSETSAVSVRQPVGPPRRCR 357
RG+ G +T+ DG+ H + P P R + G E V+ P G RR R
Sbjct: 83 RGRRRQRRGPGTATTMLEDGSIHTQRGSPPLPPRSGQRGGEEGEVAAAAPGGGGRRWR 140
>01_01_0085 -
639959-640192,640290-640379,640465-640521,640826-640858,
640972-641046,641141-641230,641343-641444,641643-641713,
642243-642396,642497-642573,643077-643113
Length = 339
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 308 VSEPSIRLEGSVGWASLG*AAPSGCSVDRGSPPTSSGF*PRRGSDVGCKSAEESFSGWAL 129
VS S EGS + S+ GSP +S+G G+ G ++ F G L
Sbjct: 269 VSRTSSCREGSGRFQEQRSVVTRTSSIREGSPESSNGASSSTGASTGTNTSTSRFGGLRL 328
Query: 128 KSLG 117
LG
Sbjct: 329 PGLG 332
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,399,201
Number of Sequences: 37544
Number of extensions: 520575
Number of successful extensions: 2119
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2115
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -