Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_P10
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 163 9e-41
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 163 9e-41
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 163 9e-41
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 163 9e-41
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 163 9e-41
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 163 9e-41
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 163 9e-41
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 163 9e-41
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 163 9e-41
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 157 6e-39
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 155 2e-38
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 93 3e-19
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 87 2e-17
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 53 2e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 44 1e-04
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.68
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.68
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.68
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 29 2.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.3
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.3
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.3
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.3
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 163 bits (397), Expect = 9e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
Score = 124 bits (299), Expect = 7e-29
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 163 bits (397), Expect = 9e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
Score = 125 bits (301), Expect = 4e-29
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 163 bits (397), Expect = 9e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
Score = 124 bits (299), Expect = 7e-29
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (397), Expect = 9e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
Score = 125 bits (301), Expect = 4e-29
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (397), Expect = 9e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
Score = 125 bits (301), Expect = 4e-29
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (397), Expect = 9e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
Score = 124 bits (299), Expect = 7e-29
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 163 bits (397), Expect = 9e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 257 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 316
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 317 QEYDESGPSIVHRKCF 332
Score = 125 bits (301), Expect = 4e-29
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 197 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 256
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 163 bits (397), Expect = 9e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 287 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 346
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 347 QEYDESGPSIVHRKCF 362
Score = 125 bits (301), Expect = 4e-29
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 227 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 286
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 163 bits (397), Expect = 9e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 361 QEYDESGPSIVHRKCF 376
Score = 125 bits (301), Expect = 4e-29
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 157 bits (382), Expect = 6e-39
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301 SGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 359
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 360 QEYDESGPSIVHRKCF 375
Score = 124 bits (299), Expect = 7e-29
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVL
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL 300
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 155 bits (377), Expect = 2e-38
Identities = 72/76 (94%), Positives = 74/76 (97%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 300 SGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 359
Query: 373 QEYDESGPSIVHRKCF 326
QEYDESGPSIVHRKCF
Sbjct: 360 QEYDESGPSIVHRKCF 375
Score = 121 bits (291), Expect = 6e-28
Identities = 53/60 (88%), Positives = 55/60 (91%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
YE PDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVL
Sbjct: 240 YELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVL 299
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMW 383
+GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW
Sbjct: 358 TGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMW 417
Query: 382 ISKQEYDESGPSIVHRKC 329
+SK EYDESG SIV +KC
Sbjct: 418 VSKAEYDESGKSIVEKKC 435
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = -3
Query: 734 YEFPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 570
Y FP+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 569 ANTVL 555
+N +
Sbjct: 353 SNVTV 357
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 374
SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K
Sbjct: 299 SGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGK 358
Query: 373 QEYDESGPSIVHRKCF 326
+EY++ G S +H++ F
Sbjct: 359 KEYEDMGASAMHKRFF 374
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = -3
Query: 743 REXYEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYAN 564
+ Y PD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N
Sbjct: 236 KSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSN 295
Query: 563 TVL 555
VL
Sbjct: 296 IVL 298
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 13/80 (16%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILAS 407
SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+
Sbjct: 304 SGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLAN 363
Query: 406 L--STFQQMWISKQEYDESG 353
L Q W+SK+EY+E G
Sbjct: 364 LMKDRDQDFWVSKKEYEEGG 383
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = -3
Query: 740 EXYEFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 561
+ Y PDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y +
Sbjct: 242 QQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHI 301
Query: 560 VL 555
VL
Sbjct: 302 VL 303
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/73 (34%), Positives = 46/73 (63%)
Frame = -1
Query: 586 SVRTCTPTPYCSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 407
S RT Y +GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS
Sbjct: 467 SRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVAS 526
Query: 406 LSTFQQMWISKQE 368
STF+ IS Q+
Sbjct: 527 ASTFEDSCISLQQ 539
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = -3
Query: 704 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYL 477
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 16/86 (18%)
Frame = -1
Query: 553 SGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGG 422
SGG+TM+ A ++Q+++ L+ P + +++I+ ++Y+VW GG
Sbjct: 329 SGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGG 388
Query: 421 SILASLSTFQQMWISKQEYDESGPSI 344
S+LAS S F Q+ +K EY E GPSI
Sbjct: 389 SMLASTSEFYQVSHTKAEYMERGPSI 414
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 710 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVL 555
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VL
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVL 328
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = -3
Query: 710 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIV 314
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -1
Query: 550 GGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWI 380
GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWI 371
Query: 379 SKQEYDESGPSIVHRKCF*T 320
+++++DE G S+ F T
Sbjct: 372 NRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = -3
Query: 710 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 555
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIV 314
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -1
Query: 550 GGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWI 380
GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWI 371
Query: 379 SKQEYDESGPSIVHRKCF*T 320
+++++DE G S+ F T
Sbjct: 372 NRKDWDERGDSLEFSNFFQT 391
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 431 PYGVLPLWRSNDLNLHCRWGESCD 502
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 431 PYGVLPLWRSNDLNLHCRWGESCD 502
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 431 PYGVLPLWRSNDLNLHCRWGESCD 502
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = -1
Query: 733 TNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SATWTSVRTCTPTPYC 554
T F S+ S T S+ S+NP + ++S+ P + S S++ + + T TP+
Sbjct: 1023 TGFGNPASTASTTSGSLFGGASTNPPMFGGP-SSSSIPAFSTSNSSSTSGFPSSTATPFG 1081
Query: 553 SGGTTMYPGI 524
+ GTT G+
Sbjct: 1082 NAGTTSTSGV 1091
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 702 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 589
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 702 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 589
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 702 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 589
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 702 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 589
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 702 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 589
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 267 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 359
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = -1
Query: 568 PTPYCSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGGSI 416
P +GG + PG+ R+++EI + + KI +I E K + W+G S+
Sbjct: 211 PNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASL 270
Query: 415 LASL-STFQQMWISKQEY 365
L SL T ++ ++ +E+
Sbjct: 271 LGSLRETIERKSLTLEEW 288
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 370 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 269
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 267 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 359
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 451 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 290
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,095,412
Number of Sequences: 27780
Number of extensions: 359381
Number of successful extensions: 1012
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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