Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_P04
         (818 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021436-1|AAX33584.1|  984|Drosophila melanogaster GH14495p pro...    30   4.4  
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    30   4.4  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    30   4.4  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    30   4.4  
Z14312-1|CAA78664.1|  536|Drosophila melanogaster Cpo 61.2 protein.    29   5.8  
Z14974-1|CAA78696.1|  615|Drosophila melanogaster Cpo 61.1 protein.    29   7.6  
Z14311-1|CAA78663.1|  490|Drosophila melanogaster Cpo 17 protein.      29   7.6  
AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-P...    29   7.6  

>BT021436-1|AAX33584.1|  984|Drosophila melanogaster GH14495p protein.
          Length = 984

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +3

Query: 318  SGGGGARRQRCTRHTSAXAXQXAXXHTXAAACMRDTRGA----LPASPSRXRHR 467
            + GGG RR+R T+H  A A +    H        DT GA    +P +PS  R R
Sbjct: 912  AAGGGRRRRRLTKHHRARAPRYQDYHYTTET---DTTGAPTNTIPHNPSTWRIR 962


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311
           H PHH    H H+G+G   Q  E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311
           H PHH    H H+G+G   Q  E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 228  HAPHHALCSHDHSGSGVRSQVLERLEMR 311
            H PHH    H H+G+G   Q  E+L+++
Sbjct: 945  HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 972


>Z14312-1|CAA78664.1|  536|Drosophila melanogaster Cpo 61.2 protein.
          Length = 536

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +3

Query: 285 QVLERLEMRLRSGGGGARRQRCTR-HTSAXAXQXAXXHTXAAACMRDTRGALPASPSRXR 461
           Q  ++  + L SG   ++    T  +TSA     A     + A +  T G+LP SP+   
Sbjct: 290 QQQQQQHILLSSGSSSSKHNSNTNSNTSAGGASAAVPIATSVAAVPTTGGSLPDSPAHES 349

Query: 462 HRH 470
           H H
Sbjct: 350 HSH 352


>Z14974-1|CAA78696.1|  615|Drosophila melanogaster Cpo 61.1 protein.
          Length = 615

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 312 LRSGGGGARRQRCTR-HTSAXAXQXAXXHTXAAACMRDTRGALPASPSRXRHRH 470
           L SG   ++    T  +TSA     A     + A +  T G+LP SP+   H H
Sbjct: 298 LSSGSSSSKHNSNTNSNTSAGGASAAVPIATSVAAVPTTGGSLPDSPAHESHSH 351


>Z14311-1|CAA78663.1|  490|Drosophila melanogaster Cpo 17 protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 312 LRSGGGGARRQRCTR-HTSAXAXQXAXXHTXAAACMRDTRGALPASPSRXRHRH 470
           L SG   ++    T  +TSA     A     + A +  T G+LP SP+   H H
Sbjct: 298 LSSGSSSSKHNSNTNSNTSAGGASAAVPIATSVAAVPTTGGSLPDSPAHESHSH 351


>AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-PA
           protein.
          Length = 1354

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -2

Query: 394 CXXAXCXAXALVCRVQRCRRAPPPPLRSLI 305
           C    C    LVCR++ C   P PP R  +
Sbjct: 50  CLNCQCNRKTLVCRLKVCPEMPMPPPRGCV 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,210,364
Number of Sequences: 53049
Number of extensions: 285181
Number of successful extensions: 709
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)