Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_O24
(791 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 31 0.25
SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual 30 0.33
SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit Rpn10|... 27 2.3
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 4.1
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 5.4
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 25 9.4
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 9.4
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 25 9.4
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 9.4
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 30.7 bits (66), Expect = 0.25
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = -1
Query: 533 SLRSFLIRQRRSPEKAAASTCGTLKLGTQLSRTATSQRPSTESANEEFPNEFTSADGKPA 354
++ + +++ S + S+ G+ T S ++ S S S + +TSA G A
Sbjct: 412 TINTNIVQATISQSSTSGSSSGSSSASTTASSSSVSSGSSISSGSSSMSTSYTSASGSSA 471
Query: 353 HKDLGLFYGSS 321
H G GSS
Sbjct: 472 HSS-GSSSGSS 481
>SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 272
Score = 30.3 bits (65), Expect = 0.33
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 335 FYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMTQRL-DMYVNSLS 162
F+G S GP G L ++G++ VDL+ + +R + R+ D+Y LS
Sbjct: 213 FFGHSKIIGPTGKVIKALDEEKEGVISYTVDLDDAKPLRKNYYTFFEDRMPDLYKRLLS 271
>SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit
Rpn10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 437 FVIAAFLASTFHMYSLPPSPAIVAD 511
F+ AA + + H+ S+PPSP +++D
Sbjct: 156 FIDAANSSDSCHLVSIPPSPQLLSD 180
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 443 SRTATSQRPSTESANEEFPNEFTSADGKPAHKD 345
S+T S S SA +FP EF +A AH +
Sbjct: 256 SQTRRSSWSSIASAFNDFPEEFPNASNPEAHSN 288
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 497 PEKAAASTCGTLKLGTQLSRTATSQRPSTESANEEFPNEF 378
P + A T T KL + A+ +RP E P +F
Sbjct: 434 PNRLTAETVDTNKLTASKEQIASPKRPGPSDNGNEIPTKF 473
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 431 TSQRPSTESANEEFPNEFTSADGKPAHKDLGLFYGS 324
+S R + A +F + F+ + KP+ KDL LF+G+
Sbjct: 145 SSSRLLSTDAFSQFISSFSPPE-KPSMKDLALFHGN 179
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 494 EKAAASTCGTLKLGTQLSRTATSQRPSTESANEE 393
E AA + GTL G+Q T +Q + S N E
Sbjct: 898 EPAAGTVTGTLTSGSQFFTTTIAQASGSVSGNVE 931
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +1
Query: 355 AGFPSAEVNSFGNSSLADSVDGRCEVAVRDSCVPSFNVPHVLAAAFSGDRR*RIKNDLRL 534
+G + + SL+D ++ E ++ +PSF PH R R+ L+
Sbjct: 107 SGLSRSNATRYSRRSLSDWLETIRENNYDEASIPSFFSPHTERLV---GRVLRLNRYLQN 163
Query: 535 HSVRTSSSSRRGARPKQMFTA 597
+ +SS G+ P +F+A
Sbjct: 164 SELLDRNSSTFGSNPNSVFSA 184
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 9.4
Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Frame = -1
Query: 662 PTTXMEGNNRAIQYSRPRYGKIAVNICFGRAPRLELDDVRTEWSLRSFLIRQRR-SPEKA 486
P+ N Q S P I N+ F P + + S+ + Q+ P+ A
Sbjct: 7 PSINRRNNENPPQSSLPTTSGIVYNM-FPACPYPHVQNPAFHGSVDVPQVAQKAFDPQAA 65
Query: 485 AASTCGTLKLGTQ--LSRTATSQRPSTESANEEFPNEFTSADGKPA 354
S + T + + P+T ++N+ N TSA PA
Sbjct: 66 TVSESANVSRPTPAPVPPAGNTNTPTTSNSNQNLENNVTSAASMPA 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,981,961
Number of Sequences: 5004
Number of extensions: 56057
Number of successful extensions: 158
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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