Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_O12
         (780 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    27   0.26 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   5.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   5.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   5.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 477 LPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 385
           LP P   N  L  L+ S E+R+  +APN  V
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAPNYSV 520


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 579 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 472
           H   +  WT ++     P  G +KT SK    F+LP
Sbjct: 25  HRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 632 HTGECCGXRESDPDLVEDYEGPLTLDTTTVAH 727
           HT  CC   +  PD++   E    L T T +H
Sbjct: 54  HTDACCRTHDMCPDVMSAGESKHGL-TNTASH 84


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 632 HTGECCGXRESDPDLVEDYEGPLTLDTTTVAH 727
           HT  CC   +  PD++   E    L T T +H
Sbjct: 59  HTDACCRTHDMCPDVMSAGESKHGL-TNTASH 89


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 632 HTGECCGXRESDPDLVEDYEGPLTLDTTTVAH 727
           HT  CC   +  PD++   E    L T T +H
Sbjct: 59  HTDACCRTHDMCPDVMSAGESKHGL-TNTASH 89


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 397 GSTEDLPDLIRLEKTCEVSVGHLWLG 474
           GS +++  ++R  K C  +    W+G
Sbjct: 349 GSDQEVAGVMRAVKRCNATGAFSWIG 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,594
Number of Sequences: 438
Number of extensions: 2988
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)