Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_O09
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   111   4e-25
L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid desa...    29   5.0  
AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   6.6  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    28   8.7  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    28   8.7  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  111 bits (268), Expect = 4e-25
 Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
 Frame = -3

Query: 734 GXFXXRXFIXXIQXAXREXXFLIVXDPAQDHXPIXEASYVNIPVIALCXTDSPLRFVDIX 555
           G F        IQ   +E   L++ DP  DH  + EASYV +PVI+   T+SPL+ +DI 
Sbjct: 101 GRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIG 160

Query: 554 IPCNTKXSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDLFFYRDP 414
           +PCN K   SIGLMWW+LARE+L LRG + R   +     +++ DL+FYRDP
Sbjct: 161 VPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDP 212


>L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid
           desaturase protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 341 SNYFWFSWYHSLFPGLLFILFTFFR 415
           SN+FW+ W    F GL+ ++ T+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLVIVTYLQ 281


>AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical
           protein Y67H2A.8 protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 341 SNYFWFSWYHSLFPGLLFILFTFFR 415
           SN+FW+ W    F GL+ ++ T+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLVIVTYLQ 281


>Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical
           protein ZC412.2 protein.
          Length = 1170

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 332 MDRSNYFWFSWYHSLFPGLLFILFTFFRGHGKKTNQ 439
           M   ++F FS    +  GLLFI  +F + HG  T++
Sbjct: 690 MQMDSFFMFSLIRDISNGLLFIHNSFLKCHGHLTSR 725


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 542 TKXSHSIGLMWWLLA 498
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
            protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +1

Query: 223  LLEQGVLQKQELQRVXQAGRYLQP--MKPLAPVF 318
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +1

Query: 223  LLEQGVLQKQELQRVXQAGRYLQP--MKPLAPVF 318
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,172,424
Number of Sequences: 27780
Number of extensions: 210417
Number of successful extensions: 577
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)