Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_O09
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.79 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.79 
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   7.4  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   7.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   7.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.8  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   9.8  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   9.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 442 TTSQRWSRGSTPRSLSTSRANNHHIKP 522
           T +Q WSRG+T  SL  S  +   + P
Sbjct: 18  TQAQHWSRGNTWLSLDNSNMSMSSVGP 44


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 442 TTSQRWSRGSTPRSLSTSRANNHHIKP 522
           T +Q WSRG+T  SL  S  +   + P
Sbjct: 18  TQAQHWSRGNTWLSLDNSNMSMSSVGP 44


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 119 CINTXHWLIILHES 78
           C N  +W+I LH S
Sbjct: 418 CFNLMYWIIYLHIS 431


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 119 CINTXHWLIILHES 78
           C N  +W+I LH S
Sbjct: 418 CFNLMYWIIYLHIS 431


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = -1

Query: 406 SEKDEQQAREQXXXXXXXXXXXXVHEDWNETLEPVASW 293
           +++ +QQ ++Q              + W    EP ASW
Sbjct: 437 AQQPQQQQQQQQQQQQQQQQQQQQQQHWPMEEEPAASW 474


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 555 YPMQHQVFPLYWFDVVVV 502
           +P  ++++P Y+FD  V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 555 YPMQHQVFPLYWFDVVVV 502
           +P  ++++P Y+FD  V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 383 GLLFILFTFFRGHGK 427
           G+LF+LF+F R   K
Sbjct: 20  GVLFVLFSFLRTRTK 34


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 383 GLLFILFTFFRGHGK 427
           G+LF+LF+F R   K
Sbjct: 20  GVLFVLFSFLRTRTK 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,526
Number of Sequences: 438
Number of extensions: 2516
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)