Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_O08
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    62   2e-09
BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    31   4.3  
L13744-1|AAA58361.1|  568|Homo sapiens AF-9 protein.                   30   9.9  
BX649194-1|CAE46213.1|  298|Homo sapiens hypothetical protein pr...    30   9.9  
AL512635-1|CAH70705.1|  568|Homo sapiens myeloid/lymphoid or mix...    30   9.9  
AL354879-1|CAI14771.1|  568|Homo sapiens myeloid/lymphoid or mix...    30   9.9  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +3

Query: 585 MIGRADIEGSKSNVAMNAWLPQASYPWWYFSGTSC 689
           MIGRADIEGSKS+VAMNAW PQASYP   FS TSC
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSC 35


>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 33  AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 167
           +G S  R +HD+  PS  PR+ R  S+D S PR      PD   R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254


>L13744-1|AAA58361.1|  568|Homo sapiens AF-9 protein.
          Length = 568

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +3

Query: 24  SPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 203
           S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K      
Sbjct: 162 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFKEP 221

Query: 204 LRDPNGLRRRVSRFECETRLVKSHCLEP 287
            RD N   +  S+   E + +K   + P
Sbjct: 222 SRDHNKSSKESSKKPKENKPLKEEKIVP 249


>BX649194-1|CAE46213.1|  298|Homo sapiens hypothetical protein
           protein.
          Length = 298

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +3

Query: 24  SPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 203
           S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K      
Sbjct: 162 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFKEP 221

Query: 204 LRDPNGLRRRVSRFECETRLVKSHCLEP 287
            RD N   +  S+   E + +K   + P
Sbjct: 222 SRDHNKSSKESSKKPKENKPLKEEKIVP 249


>AL512635-1|CAH70705.1|  568|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia (trithorax homolog, Drosophila);
           tra protein.
          Length = 568

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +3

Query: 24  SPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 203
           S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K      
Sbjct: 162 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFKEP 221

Query: 204 LRDPNGLRRRVSRFECETRLVKSHCLEP 287
            RD N   +  S+   E + +K   + P
Sbjct: 222 SRDHNKSSKESSKKPKENKPLKEEKIVP 249


>AL354879-1|CAI14771.1|  568|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia (trithorax homolog, Drosophila);
           tra protein.
          Length = 568

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +3

Query: 24  SPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 203
           S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K      
Sbjct: 162 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFKEP 221

Query: 204 LRDPNGLRRRVSRFECETRLVKSHCLEP 287
            RD N   +  S+   E + +K   + P
Sbjct: 222 SRDHNKSSKESSKKPKENKPLKEEKIVP 249


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,266,161
Number of Sequences: 237096
Number of extensions: 2318588
Number of successful extensions: 5370
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5363
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)