Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_N04
(777 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 31 0.24
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo... 29 0.98
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 28 1.3
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 27 2.3
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 3.0
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 27 3.0
SPAC644.17c |mrpl9||mitochondrial ribosomal protein subunit L9|S... 25 9.2
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 25 9.2
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 9.2
SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 9.2
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/71 (22%), Positives = 28/71 (39%)
Frame = +2
Query: 386 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 565
P T+ T + PP+ P ++ TST T T + P T+++ +
Sbjct: 1643 PITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTST 1702
Query: 566 DVLSYRVTTTS 598
+ S V +S
Sbjct: 1703 PITSSSVLNSS 1713
Score = 29.5 bits (63), Expect = 0.56
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Frame = +2
Query: 371 PQQILPATTQTTILRVP-PLLHDVTPTLRKPT--------ANTCQARTSTHFTGKTCIRQ 523
P L ++ TTI P + + KPT ANT TST T T +
Sbjct: 321 PSVALSTSSTTTITNASTPAANTIISRSSKPTDTTNSISFANTTPENTSTQITSPTAVNS 380
Query: 524 RNPNTAASPDTNAPDVLSYRVTTTS 598
P T++S ++ + S + TS
Sbjct: 381 STPITSSSVLNSSTPITSSSILNTS 405
>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
Pik3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 801
Score = 28.7 bits (61), Expect = 0.98
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 508 NLHPPAEPEHRRIARHERTGRL 573
NL PAE +HRR+ R +R G L
Sbjct: 235 NLDSPAELKHRRLVRSQRNGPL 256
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 376 TNLTSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 555
TN TS H T+ +RR+ H +RE KH H ++ P + R +RH
Sbjct: 7 TNRTSTHKFNETDRETNHSRRHRHHHSRHRE-----SKHGRHDRSERPSSREAGDR-SRH 60
Query: 556 ER 561
ER
Sbjct: 61 ER 62
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 550 RHERTGRLILQGHDDFRCVNFSSPRXTCLL 639
RH + G L ++ H DF NF++P LL
Sbjct: 314 RHHQPGNLYIRFHVDFPEPNFATPEQLALL 343
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 354 TMQTSYRNKSYQPPRKLQFYGFHLSYTTLLPH*GSQPRTLVKHAQART 497
TM + ++K RKL+ HL + +L+ H QP +HAQ RT
Sbjct: 1356 TMLKTSQSKDSSSLRKLRATCLHLLFASLVAHKFDQP----QHAQTRT 1399
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 418 STSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHER 561
STS R+ E +E S H+H HR++ EP ++RH R
Sbjct: 128 STSPANRHRRKE---KERTRSNHRHGSHRRH-----EPYRTHLSRHHR 167
>SPAC644.17c |mrpl9||mitochondrial ribosomal protein subunit
L9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 341 KTFYHHANFLPQQIL 385
+TF HHAN P++IL
Sbjct: 13 RTFAHHANLTPRKIL 27
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 443 PTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNA 562
P L +PT+ Q R GK + NP + SP + A
Sbjct: 219 PLLNRPTSFNRQTRIRRAPPGKLDLSNSNPTSPVSPSSMA 258
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 356 HANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPT--ANT 472
H N + P T T VPP H T T+ PT ANT
Sbjct: 114 HVNSTTTVVPPTTHVNTTTVVPPTTHVNTTTVVPPTTHANT 154
>SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 376 TNLTSHHANYNFTGSTSLTRRYSHTEEAN 462
++ S H N N +++R+YS+T++ N
Sbjct: 83 SSFLSDHNNNNLFSDDTISRQYSNTDDIN 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,962,889
Number of Sequences: 5004
Number of extensions: 56756
Number of successful extensions: 192
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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