Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_N04
(777 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 33 0.33
05_05_0227 - 23449579-23450459,23450574-23450691 31 0.77
08_02_0707 - 20212190-20214592 30 2.4
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 29 4.1
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 29 4.1
08_01_0201 + 1635964-1637010 29 5.4
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 29 5.4
04_03_0394 - 15340726-15341990,15342091-15342186,15342278-15342302 29 5.4
04_03_0333 + 14569377-14569401,14569493-14569588,14569689-14570953 29 5.4
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 29 5.4
08_02_1284 - 25864049-25864202,25864690-25864880,25865053-258658... 28 7.2
01_07_0074 - 40894916-40895754,40896322-40896691,40897239-408972... 28 7.2
01_06_0208 - 27540077-27540992,27541310-27541497 28 7.2
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 28 7.2
12_01_1028 + 10541350-10541685,10542140-10542828,10542896-10542998 28 9.5
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 9.5
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 28 9.5
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 433 RRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGR 570
R + E EH SS +H HR + H + EHR RH+R R
Sbjct: 773 RHRDSSSEDEHEHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 388 SHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRR 543
S NY+ S +R+ H E +R H S HKH L R + EP H R
Sbjct: 725 SDEENYDSEESYKHSRK-KHRSEDSRAHTSDVHKHKLKRHS--KDLEPRHHR 773
>05_05_0227 - 23449579-23450459,23450574-23450691
Length = 332
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 266 RLDGXGGRPTGPPNDEITPPARTADIGAPRSGC-TCARVRR 147
R DG GGRP+ P E T P R GAP C C+ + R
Sbjct: 231 RGDGGGGRPSAPARREGTDPCRPVLGGAPFVICGKCSELLR 271
>08_02_0707 - 20212190-20214592
Length = 800
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 388 SHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 555
SHH +++ S + S TE + +E+ S H H H + H +E H++ H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 338 HKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPTAN 469
H+ F +FLP +I L+VPP LH V P P A+
Sbjct: 75 HRWFAQGFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPPAS 118
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 313 SRPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRRYSHTEEANREHL 474
S PAT + + P +LLT+ TSH + N T S SH + + RE L
Sbjct: 685 SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTTSSHQDASFRESL 737
>08_01_0201 + 1635964-1637010
Length = 348
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 2/98 (2%)
Frame = -2
Query: 335 SAQVAGRETSAVAAHPVRENRADRLD-GXGGRPTGPPNDEITPPARTADIGAPRSGCTCA 159
SA + G + A+ A R DRL R G P P AD+ P
Sbjct: 107 SAAMYGVKVEAIQALQANYVRRDRLTIDCAVRVVGKPRVSAAAPLTAADVPPPDLAAHLG 166
Query: 158 RVRRLVGHCAVAGPTRDVNVCS-RASVCYR*VVLASPL 48
R+ L H V R V + R + R V A+ L
Sbjct: 167 RLLDLKSHADVTFDVRGVQFAAHRVVLAMRSAVFAAEL 204
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 320 GRETSAVAAHPVRENRADRLDGXGGRPTGPPNDEITPPARTADIGAPR 177
G A +PV + R+ R G P GPPN P + PR
Sbjct: 980 GASFGAAGTNPVADKRSGRGKGHSFVPFGPPNGAHKPGVHPSGYPLPR 1027
>04_03_0394 - 15340726-15341990,15342091-15342186,15342278-15342302
Length = 461
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 263 LDGXGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAG 120
+D GG +G DE+ P R++D G PRS A HC V G
Sbjct: 1 MDSAGGN-SGKLFDEMPP--RSSDRGCPRSPSPAAMEHGFDRHCVVLG 45
>04_03_0333 + 14569377-14569401,14569493-14569588,14569689-14570953
Length = 461
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 263 LDGXGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAG 120
+D GG +G DE+ P R++D G PRS A HC V G
Sbjct: 1 MDSAGGN-SGKLFDEMPP--RSSDRGCPRSPSPAAMEHGFDRHCVVLG 45
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 575 IRRPVRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRL 459
+R R A R C GSAG R R SA V+ + RL
Sbjct: 31 LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRL 69
>08_02_1284 -
25864049-25864202,25864690-25864880,25865053-25865895,
25865953-25866896,25867052-25867190,25867259-25867334,
25867666-25867788,25867869-25867952,25868145-25868235,
25868448-25868532,25868620-25868784,25868872-25868928,
25870141-25870302
Length = 1037
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 371 PQQILPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRN--PNTAA 544
PQQ + Q+ +V L +V P + A T +S H G + + + P+T+
Sbjct: 637 PQQCVQQKVQSH--QVQDLTGNVIPNSKSDIA-TSMGASSLHVAGGRQLLKTDDVPSTST 693
Query: 545 SPDTNAPDVLSYRVTTTSDVSIFLPHGK 628
SP TN+ VL + ++S GK
Sbjct: 694 SPSTNSNPVLLQSIPSSSKNQSLTTAGK 721
>01_07_0074 -
40894916-40895754,40896322-40896691,40897239-40897291,
40897456-40897593,40897646-40897716,40898655-40898900,
40899205-40899386,40899494-40899697
Length = 700
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 153 APPRRTLCCGRSNQRRQRVFQSFSVLQISGFGF 55
APPRRT G++ + R R Q F+V Q G+
Sbjct: 48 APPRRTFSFGQAYKTRHRQPQVFTVWQTLMLGY 80
>01_06_0208 - 27540077-27540992,27541310-27541497
Length = 367
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/70 (34%), Positives = 29/70 (41%)
Frame = -2
Query: 317 RETSAVAAHPVRENRADRLDGXGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVG 138
R A AA P R+ R RP P +++ AR A R R +R VG
Sbjct: 84 RRRRAGAACPARQQRCGGF-ATAARPGNPRRGDVSWDARDGARAARR------RRQRRVG 136
Query: 137 HCAVAGPTRD 108
H VAG RD
Sbjct: 137 HAEVAGWRRD 146
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 352 PPCKLLTATNLTSHHANYNFTGSTSLTRRYSHTEEANREHL 474
P C + N S H G+T L ++ ++T NR HL
Sbjct: 96 PSCSVGVYVNCGSVHEAPETLGATQLLKKMAYTTTTNRSHL 136
>12_01_1028 + 10541350-10541685,10542140-10542828,10542896-10542998
Length = 375
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 541 RIARHERTGRLILQGHDDFRCVNFSSPRXTCLLSXFACLLEPRSH 675
++AR E + ++I++ +F ++ +S R L ACL EP+ H
Sbjct: 304 KLARIEDSIKVIVELVGEFEMLDMTSLRRDGLCEGEACLWEPKGH 348
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 242 PTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAGPTR 111
P PP PP A + APR G +V ++ +VA P R
Sbjct: 112 PPPPPTQSHQPPPPVA-VRAPRGGPRRLKVPHILSDSSVASPAR 154
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 418 STSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 558
+TSL R H + + H HA H + PP H ++ RHE
Sbjct: 5 ATSLNRSIDHKQGGQQRGTPQQHLHAGHAQE-QPPGH-GHGQVQRHE 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,229,862
Number of Sequences: 37544
Number of extensions: 456958
Number of successful extensions: 1524
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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