Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_N04
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 31 0.92
U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 30 2.1
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 30 2.1
AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 30 2.1
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 29 2.8
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 4.9
U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical pr... 24 6.2
U67954-4|AAM54180.1| 345|Caenorhabditis elegans Wrapper/rega-1/... 28 6.5
U55374-4|AAB36866.2| 589|Caenorhabditis elegans Immunoglobulin-... 28 6.5
U55374-3|ABS19462.1| 591|Caenorhabditis elegans Immunoglobulin-... 28 6.5
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 6.5
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobuli... 28 6.5
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 6.5
Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 8.6
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 8.6
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 8.6
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 28 8.6
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 28 8.6
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/70 (25%), Positives = 25/70 (35%)
Frame = +2
Query: 383 LPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNA 562
LP TT+ T+ P + + +KPT T T K P T P T
Sbjct: 591 LPFTTEQTVTTEEPTTAEKSTATQKPTTTQESVSTEKTSTTKKASTTEEPTTTDEPTTTT 650
Query: 563 PDVLSYRVTT 592
+ + TT
Sbjct: 651 ESSTTGKATT 660
>U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical
protein C24A8.1 protein.
Length = 582
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 421 TSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIAR 552
TS RR+SH + NRE ++S LH +L PP E R++ R
Sbjct: 334 TSRKRRHSHQPQGNREVVTSEESKKLH--SLKPPL-VEKRKMRR 374
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Frame = +2
Query: 392 TTQTTILRVPPLLHDVTPTLRK--PTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 565
TT T P TPT PT T T+T T P T +P T
Sbjct: 193 TTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTS 252
Query: 566 DVLSYRVTTTSDVS 607
+ + TTT+ +
Sbjct: 253 ETTTTTPTTTTQTT 266
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = +2
Query: 386 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 565
P TT TT T T PT T T+T T T P T + T P
Sbjct: 88 PTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTT----TTPTTTTTETTTTP 143
Query: 566 DVLSYRVTTTSDVSIFLP 619
+ TTT + P
Sbjct: 144 TTTTTETTTTPTTTTTTP 161
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/69 (30%), Positives = 25/69 (36%)
Frame = +2
Query: 392 TTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDV 571
TT T P TPT PT T T+T T T P T + T P
Sbjct: 103 TTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTT------PTTTTTETTTTPTT 156
Query: 572 LSYRVTTTS 598
+ TTT+
Sbjct: 157 TTTTPTTTT 165
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Frame = +2
Query: 383 LPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTS--THFTGKTCIRQ--RNPNTAASP 550
+P TT TT T T PT T A T+ T T T Q P T +
Sbjct: 216 VPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTT 275
Query: 551 DTNAPDVLSYRVTTTS 598
T P + TTT+
Sbjct: 276 PTTTPTTTTTPTTTTT 291
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +2
Query: 386 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 547
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +2
Query: 386 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 547
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical
protein Y17G9B.1 protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 133 VLWQVQPETSTCVPELQCVTDKWFWLPLYVPFKV 32
+LWQ+ +TC P LQ ++W L L + FK+
Sbjct: 421 ILWQL---ITTCKPRLQVDKERWIQLLLNIKFKI 451
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = +2
Query: 386 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 565
P TT T+ P T T T T TST T T T + T +
Sbjct: 266 PETTTTSTTTTEPTTTTSTTT---QTTTTVPTSTSTISTTSTTTTTPTTTTTTTSTTTSD 322
Query: 566 DVLSYRVTTT 595
D+L ++TTT
Sbjct: 323 DLLWVKITTT 332
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/81 (27%), Positives = 31/81 (38%)
Frame = +2
Query: 371 PQQILPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASP 550
P + P+TT TT P TPT T T +T T T T +
Sbjct: 80 PSKPKPSTTTTT--TTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTR 137
Query: 551 DTNAPDVLSYRVTTTSDVSIF 613
T +V +R +TT++ F
Sbjct: 138 STPLTEV--FRTSTTTEAPFF 156
>U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical
protein F41G3.10 protein.
Length = 198
Score = 24.2 bits (50), Expect(2) = 6.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +2
Query: 461 TANTCQARTSTHFTGKTCIRQRNPNTAASPDT 556
T C +T T TC+ NP T S T
Sbjct: 83 TCGYCTGTATTTRTSTTCVDLTNPTTGVSDCT 114
Score = 22.6 bits (46), Expect(2) = 6.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 311 SHVRLPVQTHKTFYHHANFLPQQILPATTQTTI 409
S + + V +TF L QQ+L TT+T++
Sbjct: 10 SLLEVVVALMETFSQSPQHLQQQLLSTTTRTSV 42
>U67954-4|AAM54180.1| 345|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform c
protein.
Length = 345
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 371 VRSLHGGKMSCESAQVAGRETSAVAAHPVRENRADRLDGXGGRPTGPP 228
V+ H GK +C + +AG + + + H + +R GRP GPP
Sbjct: 177 VKKHHAGKYNCLAENIAGSDRATIDIHVAEPLQGER----EGRP-GPP 219
>U55374-4|AAB36866.2| 589|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
3, isoform a protein.
Length = 589
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 213 RDLVVWRTRRPASXTVEAICP 275
R +V WR R+P V+A CP
Sbjct: 293 RPIVYWRMRKPNGDVVDAACP 313
>U55374-3|ABS19462.1| 591|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
3, isoform b protein.
Length = 591
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 213 RDLVVWRTRRPASXTVEAICP 275
R +V WR R+P V+A CP
Sbjct: 293 RPIVYWRMRKPNGDVVDAACP 313
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +2
Query: 416 VPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYRVTTT 595
VPP + T +KP+ T T+ T T P T+ S T+ + T T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 596 S 598
+
Sbjct: 643 T 643
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/69 (24%), Positives = 27/69 (39%)
Frame = +2
Query: 386 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 565
P+TT T P T T KPT +T + ++T T + P + + P
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKP 656
Query: 566 DVLSYRVTT 592
L+ + T
Sbjct: 657 VTLTTQTWT 665
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +2
Query: 416 VPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYRVTTT 595
VPP + T +KP+ T T+ T T P T+ S T+ + T T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 596 S 598
+
Sbjct: 643 T 643
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/69 (24%), Positives = 27/69 (39%)
Frame = +2
Query: 386 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 565
P+TT T P T T KPT +T + ++T T + P + + P
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKP 656
Query: 566 DVLSYRVTT 592
L+ + T
Sbjct: 657 VTLTTQTWT 665
>AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobulin
domain-containingprotein WRK-1C protein.
Length = 344
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 371 VRSLHGGKMSCESAQVAGRETSAVAAHPVRENRADRLDGXGGRPTGPP 228
V+ H GK +C + +AG + + + H + +R GRP GPP
Sbjct: 176 VKKHHAGKYNCLAENIAGSDRATIDIHVAEPLQGER----EGRP-GPP 218
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 118 GPATAQCPTRRRTL-AQVQPERGAPISAVRAGG 213
GP A CP RTL A PE G +A AGG
Sbjct: 292 GPDAAYCPCPPRTLGAGAYPEGGDAAAAAPAGG 324
>Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical
protein H08M01.1 protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 464 ANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYRVTTTSDVSIFLPH 622
A+ Q RTS + + + R A+P T P + +TSD + +PH
Sbjct: 210 ASHTQYRTSPYVSARQGHRLAIARGRAAPGTLDPSASRQSIPSTSDAPVLVPH 262
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.9 bits (59), Expect = 8.6
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Frame = +2
Query: 329 VQTHKTFYHHANF---LPQQILPATTQTTILRVPPLLHD----VTPTLRKPTANTCQART 487
VQ HKTF+ N+ L + ++ TT+L L+++ T T A C+ +
Sbjct: 509 VQAHKTFFSSFNYFQVLSESLIAYPNCTTVLM--QLIYNPRTKETRTEITSDAEGCKKTS 566
Query: 488 STHFTGKTCIRQRNPNTAASPDTNAPDVLSYRVTTTSDVSIFLPHGKLACF 640
ST T + +T A+P T P +Y T + LP G++ F
Sbjct: 567 STPTPSSTSVH----STTATPST-TPGTTTYN-WPTGGTTRMLPSGEIVGF 611
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2
Query: 374 AVRSLHGGKMSCESAQVAGRETSAVA-AHPVRENR--ADRLDGXGGRPTGPPNDEITPP 207
AV GG +CE+ + G A A +P R + A L G G+P P + ITPP
Sbjct: 90 AVHGGGGGGGNCEACCLPGPAGPAGAPGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPP 148
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Frame = -2
Query: 356 GGKMSCESAQVAGRE-TSAVAAHPVRENR--ADRLDGXGGRPTGPPNDEIT-PPARTADI 189
GG SC + G S P R R A L G GRP P IT PP R
Sbjct: 101 GGGGSCSGCCLPGPAGPSGAPGKPGRPGRPGAGGLPGNPGRPPAQPCHPITPPPCRPCPQ 160
Query: 188 GAP 180
G P
Sbjct: 161 GPP 163
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 337 SQDILPPCKLLTATNLTSHHANYNFTG--STSLTRRYSHTEEANREHLSSTHKHALHRKN 510
S ++ + T T +S NYN ++S + + ++++H S K + +KN
Sbjct: 13 STELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKN 72
Query: 511 LHPPAEPE 534
P +P+
Sbjct: 73 RSPSPQPQ 80
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 337 SQDILPPCKLLTATNLTSHHANYNFTG--STSLTRRYSHTEEANREHLSSTHKHALHRKN 510
S ++ + T T +S NYN ++S + + ++++H S K + +KN
Sbjct: 13 STELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKN 72
Query: 511 LHPPAEPE 534
P +P+
Sbjct: 73 RSPSPQPQ 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,174,092
Number of Sequences: 27780
Number of extensions: 359128
Number of successful extensions: 1272
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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