Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_M24
         (792 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK001361-1|BAA91649.1|  674|Homo sapiens protein ( Homo sapiens ...    32   2.1  
U83981-1|AAC25631.1|  674|Homo sapiens apoptosis associated prot...    31   6.3  
CR457259-1|CAG33540.1|  674|Homo sapiens PPP1R15A protein.             31   6.3  
BC003067-1|AAH03067.1|  674|Homo sapiens protein phosphatase 1, ...    31   6.3  

>AK001361-1|BAA91649.1|  674|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10499 fis, clone NT2RP2000346, weakly similar to
           MYELOID DIFFERENTIATION PRIMARY RESPONSE PROTEIN MYD116.
           ).
          Length = 674

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +2

Query: 392 RGNRSPSANPEAP-NDPREWDYRQSERPSSVWSQM-EEAGIWEPRRRDESSTPCE 550
           +G R  S +P +  +DPR W+YR  E       +  EE G  E     +SS P +
Sbjct: 241 KGARKTSVSPRSSGSDPRSWEYRSGEASEEKEEKAHEETGKGEAAPGPQSSAPAQ 295


>U83981-1|AAC25631.1|  674|Homo sapiens apoptosis associated protein
           protein.
          Length = 674

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +2

Query: 392 RGNRSPSANPEAP-NDPREWDYRQSERPSSVWSQM-EEAGIWEPRRRDESSTPCE 550
           +G R  S +P +  +DPR W+YR  E       +  +E G  E     +SS P +
Sbjct: 241 KGARKTSVSPRSSGSDPRSWEYRSGEASEEKEEKAHKETGKGEAAPGPQSSAPAQ 295


>CR457259-1|CAG33540.1|  674|Homo sapiens PPP1R15A protein.
          Length = 674

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +2

Query: 392 RGNRSPSANPEAP-NDPREWDYRQSERPSSVWSQM-EEAGIWEPRRRDESSTPCE 550
           +G R  S +P +  +DPR W+YR  E       +  +E G  E     +SS P +
Sbjct: 241 KGARKTSVSPRSSGSDPRSWEYRSGEASEEKEEKAHKETGKGEAAPGPQSSAPAQ 295


>BC003067-1|AAH03067.1|  674|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 15A protein.
          Length = 674

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +2

Query: 392 RGNRSPSANPEAP-NDPREWDYRQSERPSSVWSQM-EEAGIWEPRRRDESSTPCE 550
           +G R  S +P +  +DPR W+YR  E       +  +E G  E     +SS P +
Sbjct: 241 KGARKTSVSPRSSGSDPRSWEYRSGEASEEKEEKAHKETGKGEAAPGPQSSAPAQ 295


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,143,164
Number of Sequences: 237096
Number of extensions: 3154806
Number of successful extensions: 8436
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8433
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)