Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_M24
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    38   0.008
U41012-7|AAM75375.1|  639|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U41012-6|AAM75376.1|  642|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U80454-4|AAB37876.3|  896|Caenorhabditis elegans Prion-like-(q/n...    28   6.7  
U41545-7|AAK39136.1|  687|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guany...    28   6.7  
AC024876-12|AAF60896.2|  498|Caenorhabditis elegans Hypothetical...    28   6.7  
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U53340-3|AAA96208.1|  578|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -1

Query: 702 TNKVPSSWKTXHVHPIPQEXVTGRXPSXYRPIAITSLLSKVMERII 565
           TN +P  WK  +V  IP+        S YRPI++ S ++K++E+ I
Sbjct: 377 TNIIPDKWKKANVIMIPKPKKDPAIASSYRPISLLSPIAKLLEKAI 422


>U41012-7|AAM75375.1|  639|Caenorhabditis elegans Hypothetical
           protein C06A6.2a protein.
          Length = 639

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 357 RALPMEHTV*NTEGTEVPPQTQRLQTIRENGI--IDNPNGPPLYGVK 491
           R+   +H    T   + P  ++  Q + +N I  +DN NGPPL  VK
Sbjct: 392 RSKKEDHAASTTSVLQAPNYSELKQMLEKNNILKVDNENGPPLKRVK 438


>U41012-6|AAM75376.1|  642|Caenorhabditis elegans Hypothetical
           protein C06A6.2b protein.
          Length = 642

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 357 RALPMEHTV*NTEGTEVPPQTQRLQTIRENGI--IDNPNGPPLYGVK 491
           R+   +H    T   + P  ++  Q + +N I  +DN NGPPL  VK
Sbjct: 392 RSKKEDHAASTTSVLQAPNYSELKQMLEKNNILKVDNENGPPLKRVK 438


>Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 127 RLILSTSLXLKKDMS*RSGNTAEGSSFHSRMVRGKKD 237
           RL+    L  +K  S  +G++   SS HS  +R KKD
Sbjct: 883 RLLNQKDLEKEKKRSSMAGSSVTSSSAHSHSIRSKKD 919


>Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 127 RLILSTSLXLKKDMS*RSGNTAEGSSFHSRMVRGKKD 237
           RL+    L  +K  S  +G++   SS HS  +R KKD
Sbjct: 883 RLLNQKDLEKEKKRSSMAGSSVTSSSAHSHSIRSKKD 919


>U80454-4|AAB37876.3|  896|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 66
           protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 292 LLRWRAVRW*KRDAGIISNNSSEHSPWNIRYKIQREPKS-LRKPRGSKRSER 444
           L+ W   +W K+DAG ++   SE+   NI  K++  P   +RK   SKR ++
Sbjct: 530 LIMWGIQKWLKKDAGRVT-QFSEYIWKNIIEKMEGHPWGVVRKHTPSKRKDQ 580


>U41545-7|AAK39136.1|  687|Caenorhabditis elegans Hypothetical
           protein C02F12.8 protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 259 HPQCVSRDLFCHVPSGYGMSSPPRCFPSAMT 167
           HPQ V++ +  HVP G    +PP+  P+  T
Sbjct: 162 HPQIVNQPMHPHVPVGSQNYNPPQFVPAPPT 192


>AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-33 protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 127 RLILSTSLXLKKDMS*RSGNTAEGSSFHSRMVRGKKD 237
           RL+    L  +K  S  +G++   SS HS  +R KKD
Sbjct: 883 RLLNQKDLEKEKKRSSMAGSSVTSSSAHSHSIRSKKD 919


>AC024876-12|AAF60896.2|  498|Caenorhabditis elegans Hypothetical
           protein Y94H6A.1 protein.
          Length = 498

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/79 (22%), Positives = 38/79 (48%)
 Frame = -2

Query: 362 CSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSAVF 183
           CS E F+ +    F  +TA HR+      +EP+ S  V  +   L + I +++E  +   
Sbjct: 332 CSAEWFQELSGLSFEAQTAVHRAISE--IMEPMDSLDVSIEELVLMKFIMMFSEPSTQTS 389

Query: 182 PERYDMSFFKXRLVESIKR 126
            + Y +  ++ +  E +++
Sbjct: 390 GDIYRIRSYRLKYCELLQK 408


>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical protein
            C09G1.2 protein.
          Length = 1115

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +2

Query: 401  RSPSANPEAPNDPREWDYRQSERPSSVWSQMEEAG--IWEPR 520
            R+P   P+ P++P E + ++  RP     ++ E G  + EPR
Sbjct: 1054 RAPPEQPQEPDEPEESEEQEPVRPEQQNIEIPEGGGVLTEPR 1095


>U53340-3|AAA96208.1|  578|Caenorhabditis elegans Hypothetical
           protein F02E8.5 protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 274 WSHCGHPQCVSRDLFCH 224
           WS C HP CV+  +F H
Sbjct: 12  WSRCVHPSCVAWVIFIH 28


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,747,867
Number of Sequences: 27780
Number of extensions: 436036
Number of successful extensions: 1123
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)