BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_M21
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 136 9e-32
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 136 9e-32
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 136 9e-32
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 133 8e-31
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 132 1e-30
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 8.5
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 30 8.5
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 8.5
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 220 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 278
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 279 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 338
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 339 ILRQARNHKL 348
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (329), Expect = 9e-32
Identities = 65/130 (50%), Positives = 86/130 (66%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 133 bits (321), Expect = 8e-31
Identities = 64/130 (49%), Positives = 85/130 (65%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF WT+SAF +LD L+G+W+ + K N+NL
Sbjct: 235 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNL 293
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 294 PMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 353
Query: 323 YLRAAQKEEL 294
L A+ +L
Sbjct: 354 ILCQARNHKL 363
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 132 bits (319), Expect = 1e-30
Identities = 63/130 (48%), Positives = 85/130 (65%)
Frame = -1
Query: 683 FRNXPRXEVPEC*QX*TLLKLAPGGHLGRFVXWTQSAFGRLDPLFGSWKTPSKQKKNFNL 504
FRN P + + +LKLAPGGH+GRF W +SAF +LD L+G+W+ + K N+NL
Sbjct: 221 FRNIPGITLLNVSKL-NILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNL 279
Query: 503 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEES 324
P +M NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +
Sbjct: 280 PMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNT 339
Query: 323 YLRAAQKEEL 294
LR A+ +L
Sbjct: 340 ILRQARNHKL 349
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -1
Query: 560 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 426
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 70
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 583 LSPHSAGLTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSG 443
+ PH A L G G + K ++T P QR P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -1
Query: 560 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 426
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 815
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,160,844
Number of Sequences: 237096
Number of extensions: 1645588
Number of successful extensions: 3166
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3166
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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