Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_M13
(1166 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0083 + 631196-631675 33 0.33
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.3
10_08_0161 + 15312986-15313160,15313250-15313557,15313676-153137... 31 1.7
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.7
05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621 31 2.3
01_03_0064 + 12159036-12159177,12159383-12159538,12159592-12159605 31 2.3
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 30 3.1
07_03_1136 + 24218601-24218734,24218769-24219906 30 3.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 3.1
03_01_0515 - 3864796-3865425 30 4.0
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 29 5.3
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 29 5.3
01_07_0082 - 40965947-40967023 29 5.3
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 5.3
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 7.1
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 7.1
07_01_0479 + 3606663-3607448 29 7.1
>01_01_0083 + 631196-631675
Length = 159
Score = 33.5 bits (73), Expect = 0.33
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = +2
Query: 302 PPXXGGGGX----PPPXXGGGPXXGXKKXXPPPPXFWAQRAPXXERAXP 436
PP GGGG PP GGG G PPPP P R+ P
Sbjct: 79 PPQGGGGGYIPYYQPPAGGGGGGGGFNYPAPPPPNPIVPWYPWYYRSPP 127
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/92 (29%), Positives = 27/92 (29%), Gaps = 7/92 (7%)
Frame = -3
Query: 351 PPPXXGG--GXPPPPXXGGAPXF-FXXXXFXXXXXGGXXXGXXXXXXFFPPXPPXPXXFF 181
PPP GG G PPPP GG GG PP PP P F
Sbjct: 1111 PPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFR 1170
Query: 180 XXXPXXRG----XXXXXGXXGXXGXGXPXXPP 97
P G G G P PP
Sbjct: 1171 GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPP 1202
>10_08_0161 + 15312986-15313160,15313250-15313557,15313676-15313754,
15313856-15314373
Length = 359
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -3
Query: 1155 GGXEKKXXXKXXXGGGXKK--KXXGGGXPPKXGXXXXPPK 1042
GG +KK + GGG KK K GGG PK PK
Sbjct: 121 GGDDKKAEKEKGGGGGDKKAEKEKGGGDKPKEEKKAKEPK 160
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +2
Query: 239 PXXXPPXXXX*KXXXXKKXGAPPXXGGGGXPPPXXGGG----PXXGXKKXXPPPP 391
P PP K PP G PPP G P G KK PPPP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 302 PPXXGGGGXPPPXXGGGPXXGXKKXXPPPPXFWAQRAPXXERAXPQILXLGGPP 463
PP PPP G P K PPPP + P P GGPP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPP---PPKGPSPPPPPPPGGKKGGPP 378
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = -3
Query: 363 PXXGPPPXXGG---GXPPPPXXGGA 298
P PPP GG G PPPP GGA
Sbjct: 362 PSPPPPPPPGGKKGGPPPPPPKGGA 386
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +2
Query: 302 PPXXGGGGXPPPXXGGGPXXGXKKXXPPPPXFWAQRAP 415
PP G PPP GG G PPPP A R P
Sbjct: 356 PPPPKGPSPPPPPPPGGKKGG---PPPPPPKGGASRPP 390
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 363 PXXGPPPXXGGGXPPPPXXGGAP 295
P PPP G PPPP G P
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPP 354
>05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621
Length = 283
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 351 PPPXXGGGXPPPPXXGG 301
PPP GG PPPP GG
Sbjct: 52 PPPDDGGEFPPPPDDGG 68
>01_03_0064 + 12159036-12159177,12159383-12159538,12159592-12159605
Length = 103
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 296 GAPPXXGGGGXPPP 337
GAPP GGGG PPP
Sbjct: 4 GAPPNIGGGGPPPP 17
Score = 29.1 bits (62), Expect = 7.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 354 GPPPXXGGGXPPPP 313
G PP GGG PPPP
Sbjct: 4 GAPPNIGGGGPPPP 17
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 363 PXXGPPPXXGGGXPPPPXXG 304
P GPPP G G PPP G
Sbjct: 163 PQMGPPPPYGSGYAPPPPYG 182
Score = 28.7 bits (61), Expect = 9.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 350 PPXXGGGXXPPPPXGGG 300
PP G G PPPP G G
Sbjct: 168 PPPYGSGYAPPPPYGSG 184
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 287 KKXGAPPXXGGGGXPPPXXGGG--PXXGXKKXXPP--PP 391
K G PP GGGG P P GGG P G PP PP
Sbjct: 86 KLLGLPP--GGGGAPGPLGGGGARPPGGGGGGGPPSLPP 122
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 5/28 (17%)
Frame = -3
Query: 363 PXXGPPPXXG-----GGXPPPPXXGGAP 295
P GPPP G GG PPPP G P
Sbjct: 366 PGPGPPPPPGAAGRGGGGPPPPALPGGP 393
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 314 GGGGXPPPXXGGGPXXGXKKXXPPP 388
GGGG PPP GGP + PPP
Sbjct: 380 GGGGPPPPALPGGP----RARGPPP 400
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 302 PPXXGGGGXPPPXXGGGPXXGXKKXXPPPPXFWA 403
PP PPP P K PPPP W+
Sbjct: 90 PPPPPPAASPPPPPPSPPPPSPVKSSPPPPPAWS 123
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 287 KKXGAPPXXGGGGXPPPXXGGGPXXG 364
+ G P GGGG P GGGP G
Sbjct: 10 RSGGGNPRGGGGGGPRGCGGGGPRSG 35
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 299 APPXX-GGGGXPPPXXGGGPXXGXKKXXPPP 388
APP GGGG PPP G P + P P
Sbjct: 1187 APPANTGGGGSPPPSHGSPPAPKAVQSQPAP 1217
>01_07_0082 - 40965947-40967023
Length = 358
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 372 FXXPXXGPPPXXGGGXPPPPXXGG 301
+ P PPP G G PPPP G
Sbjct: 262 YGYPAQPPPPQAGYGYPPPPPQAG 285
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 295 GXPPPXGGGGXXPPPXXGGPXXG 363
G P P GGG PPP GG G
Sbjct: 384 GRPMPGGGGPGAPPPYHGGGGGG 406
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 7.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 363 PXXGPPPXXGGGXPPPPXXGGA 298
P PPP GG PPPP G+
Sbjct: 624 PPPPPPPGKPGGPPPPPPRPGS 645
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.1 bits (62), Expect = 7.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 363 PXXGPPPXXGGGXPPPPXXGGA 298
P PPP GG PPPP G+
Sbjct: 929 PPPPPPPGKPGGPPPPPPPPGS 950
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 7.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 354 GPPPXXGGGXPPPPXXGGAP 295
GPPP G PPPP G P
Sbjct: 227 GPPPGMRPGMPPPPFRPGMP 246
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,554,959
Number of Sequences: 37544
Number of extensions: 449105
Number of successful extensions: 2343
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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