Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_M02
(945 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 33 0.44
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 32 0.76
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 32 0.76
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 1.0
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 31 1.0
01_01_0715 - 5542648-5543219,5543352-5543544 31 1.3
08_02_0839 + 21693348-21694853 31 1.8
08_02_1256 + 25645085-25645396 30 2.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 2.3
07_01_0479 + 3606663-3607448 30 2.3
04_01_0034 - 401208-402923 30 2.3
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768... 30 2.3
06_02_0175 - 12624608-12625297 30 3.1
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 30 3.1
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 30 3.1
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 4.1
02_05_0686 - 30900748-30902167,30903442-30904742 29 4.1
12_02_1174 - 26696869-26698191 29 5.4
07_01_0468 + 3537669-3537890,3539003-3539130,3539398-3539621,353... 29 5.4
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 5.4
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 29 5.4
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 29 5.4
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 29 5.4
03_01_0515 - 3864796-3865425 29 5.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 7.1
07_01_0080 + 587674-588510 29 7.1
04_03_0904 + 20717005-20718087 29 7.1
12_01_0969 - 9765114-9765664,9767963-9768512,9769507-9769561,976... 28 9.4
04_04_0760 - 27837170-27837328,27837441-27837504,27837812-278381... 28 9.4
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 9.4
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 32.7 bits (71), Expect = 0.44
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 446 PXXIXPGXPPPPXXXSQPSPXPXKLSXTV-XPPPXXXAXXARSRRPA 583
P P PPPP QPSP P S T PPP +R+++PA
Sbjct: 79 PQPAAPSQPPPPQE--QPSPPPPASSNTTQQPPPPQQRQQSRAKKPA 123
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 31.9 bits (69), Expect = 0.76
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSRRPAKXXXAP 601
P PPPP P+P P PP A +R P AP
Sbjct: 129 PPPPPPPARTPMPTPTPTPTPTPTRPPVPVWAAPLPARTPTPTPSAP 175
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 410 AXLDAAHXXXXRPXXIXPGXPPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXAR 568
A DA P P PPPP +P P P + PP A AR
Sbjct: 344 ATSDAPKLMPPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPPKATMAR 396
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +2
Query: 446 PXXIXPGXPPPPXXXSQPSPXPXKLS----XTVXPPP 544
P + P PPPP +QP P P L+ ++ PPP
Sbjct: 288 PMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPPPP 324
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 470 PPPPXXXSQPSPXPXKLSXTVXPPP 544
PPPP P P P KL+ PPP
Sbjct: 351 PPPPPPPPPPPPPPPKLNTAPKPPP 375
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSRRPAKXXXAPA 604
P PPPP + P+P P PPP +R P+ APA
Sbjct: 143 PSPPPPPTVPAAPTPRP-------SPPPPAAGTNGTARAPSPPVPAPA 183
>08_02_0839 + 21693348-21694853
Length = 501
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 720 PLXXSPPPXXXPLXPLLLTXXPPSXPXSPVXQXXCCSARXXP 845
PL PPP P PLL PP P SPV +R P
Sbjct: 24 PLPYLPPPPPPPQPPLL-QLQPPPPPSSPVSFDTAFQSRISP 64
>08_02_1256 + 25645085-25645396
Length = 103
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXPXKLSXTVXPPP 544
P PPPP S P P P + PPP
Sbjct: 62 PPPPPPPPLPSPPPPPPPQQQEEQSPPP 89
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXPXKLSXTVXPPP 544
P PPPP S P P P + PPP
Sbjct: 1180 PPPPPPPPLPSGPPPQPAPPPLPIQPPP 1207
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 720 PLXXSPPPXXXPLXPLLLTXXPPSXPXSPV 809
PL SPPP P P L PP P P+
Sbjct: 1159 PLPPSPPPATPPPPPPLSPSLPPPPPPPPL 1188
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 447 PXXSDQXDPXPXXSXPNXLPXXXSXRXXSXPPPPXXXPXPDXAAPQ 584
P S P S P P S PPPP P P PQ
Sbjct: 1150 PSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQ 1195
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 446 PXXIXPGXPPPPXXXSQPSPXPXKLSXTVXPP 541
P + PG PPPP P P P PP
Sbjct: 229 PPGMRPGMPPPPFRPGMPPPPPGPQQPGQNPP 260
>04_01_0034 - 401208-402923
Length = 571
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 446 PXXIXPGXPPPPXXXSQPSPX-PXKLSXTVXPPPXXXAXXARSRRP 580
P P PPPP + P P + PPP A A+ +RP
Sbjct: 300 PLQPRPAPPPPPPQQQRAKPSRPPPPPPPLDPPPRAAAPPAKCKRP 345
>01_01_0975 -
7686297-7686458,7687117-7687245,7687754-7687831,
7688011-7688469,7690648-7690788,7691771-7692421
Length = 539
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 470 PPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSRRPA 583
PPPP +QP P PPP A A +PA
Sbjct: 367 PPPPSPHAQPPLLPVWPRHLAPPPPPLPAAWAHGHQPA 404
>06_02_0175 - 12624608-12625297
Length = 229
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 582 AGRRDRAXXAXXXGGGXTVXXSLXGXGXGWEXXXGGGGXPG 460
AGR+D GG G G GW GGGG G
Sbjct: 60 AGRKDGGGGGGGGGGSSGGSSWSYGWGWGWGTDSGGGGSSG 100
>06_01_0039 -
386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 443 RPXXIXPGXPPPPXXXSQPSPXPXKLSXTVXPPP 544
RP PPPP + P P P PPP
Sbjct: 40 RPEPDQAAPPPPPQPHTAPPPPPPNAEPEAPPPP 73
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 470 PPPPXXXSQPSPXPXKLSXTVXPPP 544
PPPP +P P P K PPP
Sbjct: 172 PPPPPPAPEPEPEPPKKEEPQPPPP 196
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXPXKLSXTVXPPP 544
P PPPP P P P + + PPP
Sbjct: 429 PLPPPPPPPPPPPPPLPPNMPPPLPPPP 456
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 464 GXPPPPXXXSQPSPXPXKLSXTVXPPP 544
G PPPP P P P K PPP
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSPPPPPP 369
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 446 PXXIXPGXPPPPXXXSQPSPXPXKLSXTVXPPP 544
P P PPPP P P P + PPP
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP 368
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 446 PXXIXPGXPPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXAR 568
P P PPPP S P P P PPP +R
Sbjct: 348 PPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASR 388
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 446 PXXIXPGXPPPPXXXSQPSPXPXKLSXTVXPPP 544
P + P PPPP PS P + PPP
Sbjct: 182 PPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPP 214
>07_01_0468 +
3537669-3537890,3539003-3539130,3539398-3539621,
3539660-3540062,3540398-3540473
Length = 350
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 470 PPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSRRPAKXXXAPAT 607
PPPP +QP+ P ++ PPP + RRP AT
Sbjct: 21 PPPPPPRAQPALVPPRI--LPLPPPAFHGAAVQRRRPRPPPRDEAT 64
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 470 PPPPXXXSQPSPXPXKLSXTVXPP 541
PPPP P P P +S T PP
Sbjct: 90 PPPPPLLPTPPPPPASISPTPAPP 113
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 470 PPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSRR 577
PPPP QP P + T PPP A +RR
Sbjct: 79 PPPPETLEQPE--PSTTTTTTTPPPPEPEAEAEARR 112
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSRRPAK 586
P PPPP P+P P S PPP A + P K
Sbjct: 4 PAEPPPPEHPPTPAPAPAPAS----PPPHPAASGNEAAAPPK 41
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 470 PPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSRRP 580
PPPP + SP P + V PPP A+ P
Sbjct: 80 PPPPQKPDKVSPPPAQKPSKVSPPPPPPQKSAKVSPP 116
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 420 TLRTPXXXXPXXSDQXDPXPXXSXPNXLPXXXSXRXXSXPPPPXXXPXPDXAAPQSXSXX 599
T +P P S P P + P P S PPPP P P A
Sbjct: 44 TEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPP 103
Query: 600 P 602
P
Sbjct: 104 P 104
Score = 28.7 bits (61), Expect = 7.1
Identities = 25/94 (26%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Frame = +3
Query: 531 SXPPPPXXXPXPDXAAPQSXSXXPXRXXXXXLLPXXXXXXCXSYFTXVXXXXXVSPIXXX 710
S P PP P A P S + P L+P V P+
Sbjct: 38 SPPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPP------PSVTSSPPPPPLPPP 91
Query: 711 YXXPLXXSPPPXXXPLXPLLLTXXPPSXP-XSPV 809
P PPP P P + PP P SPV
Sbjct: 92 PPPPAASPPPPPPSPPPPSPVKSSPPPPPAWSPV 125
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSRRPAKXXXAP 601
P PPPP ++P+ P PPP + A S+ P P
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPP 593
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXP-------XKLSXTVXPPPXXXAXXARSRRP-AKXXXAPA 604
P PPPP + +P P K TV PPP R P +K APA
Sbjct: 748 PAPPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPPSSKGLNAPA 803
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXPXKLSXTVXPPP 544
P PPPP S P P P PPP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 461 PGXPPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSRRP 580
P PPPP S P P PPP RS P
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPPPPPPPPLFTRRSHAP 130
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +3
Query: 411 PSWTLRTPXXXXPXXSDQXDPXPXXSXPNXLPXXXSXRXXSXPPPPXXXPXPDXAAPQSX 590
P+ T TP P Q P P P P + P P P P PQ
Sbjct: 164 PTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPK 223
Query: 591 SXXP 602
P
Sbjct: 224 PNPP 227
>12_01_0969 -
9765114-9765664,9767963-9768512,9769507-9769561,
9769918-9769980,9770547-9771325
Length = 665
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +1
Query: 442 PXXXHXTRXTPXPXXPLPTXSRPXQAXXHXPPPP 543
P H P P P P RP + PPPP
Sbjct: 7 PLVSHLPSRKPPPIRPRPPPVRPYASSAASPPPP 40
>04_04_0760 -
27837170-27837328,27837441-27837504,27837812-27838160,
27838906-27838960,27839489-27839821
Length = 319
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 460 TRXTPXPXXPLPTXSRPXQAXXHXPPPP 543
T TP P P P+ S P PPPP
Sbjct: 5 TTTTPPPPPPPPSESTPTSDPKPPPPPP 32
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 470 PPPPXXXSQPSPXPXKLSXTVXPPPXXXAXXARSR 574
PPPP P P P L+ P P R+R
Sbjct: 42 PPPPGVPPPPPPPPQTLAAAASPRPEEAVRKRRNR 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,160,054
Number of Sequences: 37544
Number of extensions: 235002
Number of successful extensions: 2793
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2309
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -