Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_L21
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0006 - 13666961-13667755 32 0.46
02_02_0171 - 7427862-7428293 32 0.61
05_07_0124 - 27852840-27853571,27853726-27853769,27854224-278542... 31 1.1
04_03_0531 + 16817676-16818299 31 1.1
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591... 31 1.4
11_06_0386 + 23012139-23012530,23012773-23012955,23013094-230131... 30 1.9
05_05_0255 + 23643568-23644761 30 1.9
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 30 2.5
05_05_0263 - 23673014-23673697,23673772-23674188 30 2.5
01_06_1312 - 36205549-36206649,36207558-36207883,36209083-362091... 30 2.5
03_06_0321 + 33112793-33113026,33113166-33113546 29 3.2
03_01_0038 - 340564-341108,341214-341463,341546-341649,341728-34... 29 3.2
02_05_0747 + 31461431-31461688 29 3.2
02_02_0637 - 12491706-12492575,12492580-12492657 29 3.2
12_02_1041 + 25626210-25626595,25628607-25630542,25630572-25630613 29 4.3
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 29 4.3
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 29 4.3
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 29 5.7
07_01_1105 - 10173039-10173156,10173715-10173716,10174550-101745... 29 5.7
06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850 29 5.7
11_08_0098 - 28334865-28336114,28336228-28336357 28 7.5
09_04_0367 - 16978069-16978085,16978514-16978611,16979069-169792... 28 7.5
03_01_0489 - 3709709-3709864,3710166-3710318,3710408-3710626 28 7.5
04_04_0007 + 22119477-22120004 28 9.9
03_05_1004 + 29621209-29621590,29622615-29622827,29622974-296233... 28 9.9
03_05_0310 + 23008915-23009841,23010401-23011162 28 9.9
01_01_0459 + 3400288-3400729,3400760-3400806,3401055-3401141,340... 28 9.9
>03_03_0006 - 13666961-13667755
Length = 264
Score = 32.3 bits (70), Expect = 0.46
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = -3
Query: 438 GGEQHQGRHQHERARQNHCVEGRGGHSRAHGLRAVRHAEGAGQQQRSLPV--------HT 283
GG+ H+ RH+H ++H GR GH+ L A+ G+G Q + V
Sbjct: 97 GGDHHRVRHRH----RHHRDRGRRGHAAVVDLSALVAGNGSGSTQIAPAVAGNDTAGHRG 152
Query: 282 ERARQGLQVGSVPRDRGHRR 223
R +G + G R RGH R
Sbjct: 153 NRTARGGRGGGRGRRRGHGR 172
>02_02_0171 - 7427862-7428293
Length = 143
Score = 31.9 bits (69), Expect = 0.61
Identities = 22/54 (40%), Positives = 24/54 (44%)
Frame = +2
Query: 419 PWCCSPPGSSRPR*VAPTAARSGTSSVEPRSSSPRCIYGRERMTCTC*YSSRPS 580
PW SPP R R S T+SV P SPR R R +CT RPS
Sbjct: 14 PWLSSPPARRRRR------QGSSTASVAPTGGSPR---RRRRRSCTTPGGRRPS 58
>05_07_0124 -
27852840-27853571,27853726-27853769,27854224-27854272,
27854753-27854857,27855257-27855366,27857165-27857823,
27858355-27858572
Length = 638
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -3
Query: 423 QGRHQHERARQNHCVEGRGGHSRAHGLRAVRHAEGAGQQQRSLPVHTERARQGLQVGSVP 244
+G H+ + R++ E G + A G A +GAG ++ ER +G +
Sbjct: 213 RGEHRGD-VREDEVGEAEAGEAEAGGAAARAELDGAGAREAEDVGEGERRVAEAALGELD 271
Query: 243 RDRGHRRHTQVH 208
D G R H H
Sbjct: 272 EDEGGRPHGGAH 283
>04_03_0531 + 16817676-16818299
Length = 207
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 495 EDVPDRAAVGATQRGRELPGGEQ-HQGRHQHERARQNHCVEGRGGH 361
+D+ A+ G R R+ E HQ RHQ +R ++NH V GH
Sbjct: 44 DDMVSDASSGPPPRMRDEDDDEVWHQHRHQQQRRQRNHLVGCHTGH 89
>07_01_0769 +
5908942-5908946,5909085-5909666,5910370-5910429,
5910635-5910674,5910767-5910860,5911582-5911952
Length = 383
Score = 30.7 bits (66), Expect = 1.4
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Frame = -3
Query: 453 GRELPGGEQHQ--GRHQHERA--RQNHCVEGRGGHSR--AHGLRAV--RHAEGAGQ--QQ 304
G P GE+ + G Q + R+ H E RG R HG + R E + Q Q+
Sbjct: 34 GERHPRGEKRRRVGNDQKVKVDDREQHWCEERGEKRRRVGHGQQRSHQRDQERSHQHDQE 93
Query: 303 RSLPVHTERARQGLQVGSVPRD--RGHRR 223
RS+ ER+ Q Q GSV RD R H+R
Sbjct: 94 RSVERDQERSHQRDQEGSVERDQERSHQR 122
>11_06_0386 +
23012139-23012530,23012773-23012955,23013094-23013151,
23013828-23013872
Length = 225
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -3
Query: 453 GRELPGGEQHQG----RHQHERARQNHCVEGRGGHSRAHGLRAVRHAEGAGQQQR 301
GR +P G R +H R + C + G +RA G R+ + +GQ++R
Sbjct: 40 GRRVPAAAAAAGGSACRRRHRRGGRRGCAKNGAGSARACGARSPTSSASSGQRRR 94
>05_05_0255 + 23643568-23644761
Length = 397
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 368 VATPVHMDFVQYDTQKGRDNNSGAYLFIPSGPAKGFKSDPYPEIVVTEGIH 216
V TP++ D YD K ++ G LF+ G ++ + + YP EGI+
Sbjct: 282 VETPINNDGAPYDW-KELESLGGRVLFVARGCSRSYDAGDYPGDEFNEGIY 331
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/83 (27%), Positives = 27/83 (32%)
Frame = -3
Query: 525 QRGLLERGSTEDVPDRAAVGATQRGRELPGGEQHQGRHQHERARQNHCVEGRGGHSRAHG 346
QR L+ G A R G H+GR GRGG R
Sbjct: 481 QRELVATGEAAATAAATAKATPPLARRTADGGAHRGRGGGGAEADGGARRGRGGGWRRTA 540
Query: 345 LRAVRHAEGAGQQQRSLPVHTER 277
V AE G +QRS + R
Sbjct: 541 TLVVATAEAGGGRQRSSGMRQRR 563
>05_05_0263 - 23673014-23673697,23673772-23674188
Length = 366
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 362 TPVHMDFVQYDTQKGRDNNSGAYLFIPSGPAKGFKSDPYPEIVVTEGIH 216
TP++ D Y K ++ G LF+ G ++ + +D YP EG++
Sbjct: 254 TPINNDGAPY-AWKELESLGGRMLFVARGCSRSYDADKYPGAEFNEGVY 301
>01_06_1312 -
36205549-36206649,36207558-36207883,36209083-36209198,
36210472-36211577
Length = 882
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Frame = -3
Query: 555 VHVILSRPYIQRGLLERGSTEDVPDRAAVGATQRGRELPGGEQHQGRHQHERARQNHCVE 376
V V ++ + RGL S D D A V A RG + H H H+ +
Sbjct: 358 VRVQYNKMVLPRGLGGSSSPVDEQDAAPVKAPPRGFIYIDYDGHGHGHGHDEQAASLAAA 417
Query: 375 GRGGHSRAHGLRAVRHAE-GAGQQQRSLPVHTERARQGLQV 256
G H G RH E G + +L + + G QV
Sbjct: 418 GAVSHGDVRGGERERHEEHGLHGDELALALQPQPGPVGHQV 458
>03_06_0321 + 33112793-33113026,33113166-33113546
Length = 204
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 314 PAPSACRTARSPCAREWPPRPSTQW 388
PAP R AR PC W P P W
Sbjct: 8 PAPIDPRRARFPCCIVWTPLPLISW 32
>03_01_0038 -
340564-341108,341214-341463,341546-341649,341728-343255,
343995-344056,344578-344728
Length = 879
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -3
Query: 513 LERGSTEDVPDRAAVGATQRGRELPGGEQHQGRHQHERARQNHCVEGR 370
LE+ +T++ +R V + + L GE + QHE A + H EGR
Sbjct: 265 LEKENTQNNQNRQVVTKLEPRKILEKGENTKNSKQHEVAIKTHSKEGR 312
>02_05_0747 + 31461431-31461688
Length = 85
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -3
Query: 423 QGRHQHERARQNHCVEGRGGHSRAHGLRA--VRHAEGAGQQQRSLPVHTERARQGLQVGS 250
Q RH RA + R G LR R +G+ + + ++ G VG
Sbjct: 2 QARHMSSRAARLVRARLRVGGCWVENLRMNLPRRPRASGRTDHARQMEGGKSNAGAYVG- 60
Query: 249 VPRDRGHRRHTQ 214
+PR RGHRR +
Sbjct: 61 IPRKRGHRREAR 72
>02_02_0637 - 12491706-12492575,12492580-12492657
Length = 315
Score = 29.5 bits (63), Expect = 3.2
Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 290 TGRLRCCCPAPSA---CRTARSPCAREWPPRPSTQWF*RARSCW*RPWCCSPPGSSRPR* 460
T R C P++ C T SP R PR S + RA S P+C S R
Sbjct: 84 TCRAGCSASPPASSWICGTEGSPPTRSRTPRSSRRSPARATSTTHSPFC----HSWRTTP 139
Query: 461 VAPTAARSGTSSVEP--RSSSPR 523
PT+ S TSS P R++ PR
Sbjct: 140 WLPTSCSSPTSSTSPSARATRPR 162
>12_02_1041 + 25626210-25626595,25628607-25630542,25630572-25630613
Length = 787
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 354 AHGLRAVRHAEGAGQQQRSLPVHTERARQGLQVG---SVPRDRGHRRHTQ 214
AHG RAV A G G+Q+ + + + A VG +V R G R H +
Sbjct: 713 AHGARAVAVAVGEGEQEAAECIGADEAGDERTVGGRVAVVRGGGRREHLE 762
>02_01_0282 +
1882844-1883413,1883519-1883644,1883733-1883930,
1884442-1884666,1884844-1885224,1885282-1885989,
1886546-1886839,1887211-1887709,1887949-1888721
Length = 1257
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 341 VQYDTQKGRDNNSGAYLFIPSGPAKGFKSDP 249
VQ D G+ +N GA +F GP K K P
Sbjct: 767 VQNDKSSGQPSNEGAEVFNEDGPGKSNKDGP 797
>01_06_0595 - 30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = -3
Query: 441 PGGEQHQGRHQHERARQNHCVEGRGGHSRAHGLRAVRHAEGAGQQQRSLPVHTERARQGL 262
P + +QGR+ +++ RQN V+G+ + G G +Q++L + + ++ L
Sbjct: 963 PNSKANQGRNGNKQRRQNSIVKGKVSLAHVIGKAEACSQRGGWSRQKALSIAEKLEQENL 1022
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
Frame = +2
Query: 275 ARSV*TGRLRCCCPA------PSACRTARSPCAR 358
AR V +GRLRC P+ +ACR SPC R
Sbjct: 266 ARLVVSGRLRCTSPSLALALLRAACRVRASPCLR 299
>07_01_1105 -
10173039-10173156,10173715-10173716,10174550-10174584,
10174696-10174765,10175163-10176707,10176770-10178062
Length = 1020
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +2
Query: 473 AARSGTSSVEPRSSSPRC-IYGRER 544
AAR ++ P SS PRC I+GRER
Sbjct: 168 AARPAVGALVPSSSLPRCQIHGRER 192
>06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850
Length = 1173
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 404 NGLVKTIV-SRDGVATPVHMDFVQYDTQKGRDNNSGAYLFIPSGPAK 267
+GL++T+ ++DG T V + Y R + SGAYLF P G A+
Sbjct: 774 HGLLQTVTRNKDGEHTDVGEEIGMY-----RSHGSGAYLFKPIGEAQ 815
>11_08_0098 - 28334865-28336114,28336228-28336357
Length = 459
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 232 TTISGYGSDLKPLAGPLGMNR*APLLLSRPFCVSYCTKSMC 354
++ SG GS G LGM R +LL R F Y + S C
Sbjct: 380 SSFSGIGSSFN--GGRLGMRRADEVLLERNFSARYSSSSSC 418
>09_04_0367 -
16978069-16978085,16978514-16978611,16979069-16979229,
16979320-16979548,16979731-16980593
Length = 455
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 383 VSRDGVATPVHMDFVQYDTQKGRDNNSGAYLFIPSGPAKG 264
V R+GV + D + + KGR N SG Y F G +G
Sbjct: 164 VVREGVEFYSNGDCYEGEFHKGRCNGSGVYTFFGKGKYEG 203
>03_01_0489 - 3709709-3709864,3710166-3710318,3710408-3710626
Length = 175
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 416 RPWCCSPPGSSRPR*VAPTAARSGTSSVEPRSSSPR 523
RP CC PP S + P +A G V R S PR
Sbjct: 15 RPACCRPPSSPGVQFFTPASA-GGAGGVGRRRSYPR 49
>04_04_0007 + 22119477-22120004
Length = 175
Score = 27.9 bits (59), Expect = 9.9
Identities = 27/92 (29%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Frame = -3
Query: 528 IQRGLLERGSTEDVPDRAAVGATQRGRELPGGEQHQGRHQHERARQNHCVEGRGGHSRAH 349
+QR L RG AA A G +Q QGR A V G +
Sbjct: 59 LQRNLARRGREAAASLAAAAAAAAAAAASSGDQQQQGRTTAAAA----AVLAGGESAPPA 114
Query: 348 GLRAVRHAEGA----GQQQRSLPVHTERARQG 265
RA +GA G R P H R QG
Sbjct: 115 AARAAADLDGAGVWGGAGMRGRPAHHHRLMQG 146
>03_05_1004 +
29621209-29621590,29622615-29622827,29622974-29623337,
29623751-29624573
Length = 593
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 432 EQHQGRHQHERARQNHCVEGRGGHSRAHGLRAVRHAEGAGQQQRSLP-VHTERARQGLQV 256
E+H R +H R+R++ VEG+ GH+ A + A A A Q S P H+ A GL +
Sbjct: 241 ERHMNRGRH-RSRKH--VEGQPGHA-AKAMPAAVAAAAASATQPSAPAAHSGGAVAGLAI 296
>03_05_0310 + 23008915-23009841,23010401-23011162
Length = 562
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 172 SAVLGPTRAA*SVDLCMPSVTTISGYGSDLKPLAGPLGM 288
SA +GP AA S+ C + T I G +P G LG+
Sbjct: 343 SAPIGPRSAARSLSPCHVTRTKIQGDSPAQRPTTGELGL 381
>01_01_0459 +
3400288-3400729,3400760-3400806,3401055-3401141,
3401230-3401561,3401648-3401807,3402155-3402223,
3403165-3403263
Length = 411
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 456 RGRELPGGEQHQGRHQHERARQNHCVEGRGG 364
R R L GG RH+HER H G GG
Sbjct: 108 RARVLGGGMYAAHRHRHERGAHAHGGGGGGG 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,734,413
Number of Sequences: 37544
Number of extensions: 420235
Number of successful extensions: 1473
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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