BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_L21
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U31520-1|AAC50302.1| 1144|Homo sapiens alpha mannosidase II prot... 42 0.002
D63998-1|BAA10017.1| 1143|Homo sapiens golgi alpha-mannosidaseII... 42 0.002
BC142696-1|AAI42697.1| 1143|Homo sapiens MAN2A1 protein protein. 42 0.002
BC142656-1|AAI42657.1| 1143|Homo sapiens MAN2A1 protein protein. 42 0.002
D55649-1|BAA09510.1| 1139|Homo sapiens alpha mannosidase II isoz... 32 2.8
AK092654-1|BAC03938.1| 354|Homo sapiens UBUNIT (EC 2.4.1.-). p... 31 3.6
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 31 6.4
BC063841-1|AAH63841.1| 601|Homo sapiens ubiquilin 4 protein. 30 8.4
BC018403-1|AAH18403.1| 601|Homo sapiens ubiquilin 4 protein. 30 8.4
AL355388-14|CAH72633.1| 601|Homo sapiens ubiquilin 4 protein. 30 8.4
AF188240-1|AAF80171.1| 601|Homo sapiens A1U protein. 30 8.4
AF113544-1|AAF19084.1| 444|Homo sapiens HRIHFB2157-like protein... 30 8.4
AB209566-1|BAD92803.1| 600|Homo sapiens ataxin-1 ubiquitin-like... 30 8.4
>U31520-1|AAC50302.1| 1144|Homo sapiens alpha mannosidase II protein.
Length = 1144
Score = 42.3 bits (95), Expect = 0.002
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Frame = -1
Query: 689 PPXXQGRGVWXSP-TISXXX---SFPVTIGPLAXTVYSVSLRDAMSINKYTSFSHVRIYN 522
P Q VW + TIS SF I PL VY + + +S SH+ Y
Sbjct: 682 PVEVQVSAVWDTANTISETAYEISFRAHIPPLGLKVYKI-------LESASSNSHLADYV 734
Query: 521 ADYWSVVLPKMFPIEQPSARLNEDVSFQAGNSTRVVT-NMNGLVKTIVSR-DGVATPVHM 348
V +F I+ +N + NS ++ + GL+K ++++ DG V++
Sbjct: 735 LYKNKVEDSGIFTIKN---MINTEEGITLENSFVLLRFDQTGLMKQMMTKEDGKHHEVNV 791
Query: 347 DFVQYDTQKGRDNNSGAYLFIPSGPAKGFKSDPYPEIVVTEG 222
F Y T RD SGAYLF+P G AK + P + VT G
Sbjct: 792 QFSWYGTTIKRDK-SGAYLFLPDGNAKPYVYTTPPFVRVTHG 832
>D63998-1|BAA10017.1| 1143|Homo sapiens golgi alpha-mannosidaseII
protein.
Length = 1143
Score = 42.3 bits (95), Expect = 0.002
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Frame = -1
Query: 689 PPXXQGRGVWXSP-TISXXX---SFPVTIGPLAXTVYSVSLRDAMSINKYTSFSHVRIYN 522
P Q VW + TIS SF I PL VY + + +S SH+ Y
Sbjct: 682 PVEVQVSAVWDTANTISETAYEISFRAHIPPLGLKVYKI-------LESASSNSHLADYV 734
Query: 521 ADYWSVVLPKMFPIEQPSARLNEDVSFQAGNSTRVVT-NMNGLVKTIVSR-DGVATPVHM 348
V +F I+ +N + NS ++ + GL+K ++++ DG V++
Sbjct: 735 LYKNKVEDSGIFTIKN---MINTEEGITLENSFVLLRFDQTGLMKQMMTKEDGKHHEVNV 791
Query: 347 DFVQYDTQKGRDNNSGAYLFIPSGPAKGFKSDPYPEIVVTEG 222
F Y T RD SGAYLF+P G AK + P + VT G
Sbjct: 792 QFSWYGTTIKRDK-SGAYLFLPDGNAKPYVYTTPPFVRVTHG 832
>BC142696-1|AAI42697.1| 1143|Homo sapiens MAN2A1 protein protein.
Length = 1143
Score = 42.3 bits (95), Expect = 0.002
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Frame = -1
Query: 689 PPXXQGRGVWXSP-TISXXX---SFPVTIGPLAXTVYSVSLRDAMSINKYTSFSHVRIYN 522
P Q VW + TIS SF I PL VY + + +S SH+ Y
Sbjct: 682 PVEVQVSAVWDTANTISETAYEISFRAHIPPLGLKVYKI-------LESASSNSHLADYV 734
Query: 521 ADYWSVVLPKMFPIEQPSARLNEDVSFQAGNSTRVVT-NMNGLVKTIVSR-DGVATPVHM 348
V +F I+ +N + NS ++ + GL+K ++++ DG V++
Sbjct: 735 LYKNKVEDSGIFTIKN---MINTEEGITLENSFVLLRFDQTGLMKQMMTKEDGKHHEVNV 791
Query: 347 DFVQYDTQKGRDNNSGAYLFIPSGPAKGFKSDPYPEIVVTEG 222
F Y T RD SGAYLF+P G AK + P + VT G
Sbjct: 792 QFSWYGTTIKRDK-SGAYLFLPDGNAKPYVYTTPPFVRVTHG 832
>BC142656-1|AAI42657.1| 1143|Homo sapiens MAN2A1 protein protein.
Length = 1143
Score = 42.3 bits (95), Expect = 0.002
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Frame = -1
Query: 689 PPXXQGRGVWXSP-TISXXX---SFPVTIGPLAXTVYSVSLRDAMSINKYTSFSHVRIYN 522
P Q VW + TIS SF I PL VY + + +S SH+ Y
Sbjct: 682 PVEVQVSAVWDTANTISETAYEISFRAHIPPLGLKVYKI-------LESASSNSHLADYV 734
Query: 521 ADYWSVVLPKMFPIEQPSARLNEDVSFQAGNSTRVVT-NMNGLVKTIVSR-DGVATPVHM 348
V +F I+ +N + NS ++ + GL+K ++++ DG V++
Sbjct: 735 LYKNKVEDSGIFTIKN---MINTEEGITLENSFVLLRFDQTGLMKQMMTKEDGKHHEVNV 791
Query: 347 DFVQYDTQKGRDNNSGAYLFIPSGPAKGFKSDPYPEIVVTEG 222
F Y T RD SGAYLF+P G AK + P + VT G
Sbjct: 792 QFSWYGTTIKRDK-SGAYLFLPDGNAKPYVYTTPPFVRVTHG 832
>D55649-1|BAA09510.1| 1139|Homo sapiens alpha mannosidase II isozyme
protein.
Length = 1139
Score = 31.9 bits (69), Expect = 2.8
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = -1
Query: 542 SHVRIY-NADYWSVVLPKMFPIEQPSARLNEDVSFQAGNSTRVV--TNMNGLVKTIVSRD 372
S VRIY + SV + FP+ + ++ F N V + + GL+K+I D
Sbjct: 732 SSVRIYLHGRQLSVSRHEAFPLRVIDSGTSD---FALSNRYMQVWFSGLTGLLKSIRRVD 788
Query: 371 GV-ATPVHMDFVQYDTQKGRDNNSGAYLFIPSGPA 270
V M + Y T+ +D SGAYLF+P G A
Sbjct: 789 EEHEQQVDMQVLVYGTRTSKDK-SGAYLFLPDGEA 822
>AK092654-1|BAC03938.1| 354|Homo sapiens UBUNIT (EC 2.4.1.-).
protein.
Length = 354
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 365 PPRPSTQWF*RARSCW*RPWCCSPPGSSRPR*VAPTAARSG--TSSVEPRSSS--PRCIY 532
PP P+ W RAR R SPPG++ + ++ R G + PRSSS RC +
Sbjct: 137 PPAPAPHWASRARRSAGRTRRASPPGAAL---ASGSSRREGRCRQARSPRSSSTISRCTW 193
Query: 533 GRERMT 550
R R T
Sbjct: 194 ERTRST 199
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = -3
Query: 474 AVGATQRGRELPGGEQHQGRHQHERARQNHCVEGRGGHSRAHGLRAVRHAEGAGQQQRSL 295
A + ++ R PG E+H RHQ H RG S A +R RH +G Q
Sbjct: 3287 AASSHEQARSSPG-ERHGSRHQQSADSSRHSGIPRGQASSA--VRDSRHWGSSGSQASDS 3343
Query: 294 PVHTERA 274
H+E +
Sbjct: 3344 EGHSEES 3350
>BC063841-1|AAH63841.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 419 PWCCSPPGSSRPR*VAPTAARSGTSSVEPRSSSP 520
PW SPP S P SGTS V P S+P
Sbjct: 332 PWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNP 365
>BC018403-1|AAH18403.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 419 PWCCSPPGSSRPR*VAPTAARSGTSSVEPRSSSP 520
PW SPP S P SGTS V P S+P
Sbjct: 332 PWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNP 365
>AL355388-14|CAH72633.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 419 PWCCSPPGSSRPR*VAPTAARSGTSSVEPRSSSP 520
PW SPP S P SGTS V P S+P
Sbjct: 332 PWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNP 365
>AF188240-1|AAF80171.1| 601|Homo sapiens A1U protein.
Length = 601
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 419 PWCCSPPGSSRPR*VAPTAARSGTSSVEPRSSSP 520
PW SPP S P SGTS V P S+P
Sbjct: 332 PWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNP 365
>AF113544-1|AAF19084.1| 444|Homo sapiens HRIHFB2157-like protein
protein.
Length = 444
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 419 PWCCSPPGSSRPR*VAPTAARSGTSSVEPRSSSP 520
PW SPP S P SGTS V P S+P
Sbjct: 175 PWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNP 208
>AB209566-1|BAD92803.1| 600|Homo sapiens ataxin-1 ubiquitin-like
interacting protein variant protein.
Length = 600
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 419 PWCCSPPGSSRPR*VAPTAARSGTSSVEPRSSSP 520
PW SPP S P SGTS V P S+P
Sbjct: 331 PWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNP 364
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,607,989
Number of Sequences: 237096
Number of extensions: 2366922
Number of successful extensions: 6154
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6137
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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