Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_L21
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    37   0.019
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr...    33   0.24 
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr...    33   0.24 
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   6.7  

>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 32/88 (36%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
 Frame = -3

Query: 468 GATQRGRE-LPGGEQ-HQGRHQHERARQN--HCVEGRGGHSRAHGLRAVRHAEGAGQQQR 301
           G   RGR   PGG + H GRH          H   G GGH    G    RH  G     R
Sbjct: 222 GVEHRGRSGSPGGRRGHGGRHGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHR 281

Query: 300 SLPVHTERARQGLQVGSVPRDR-GHRRH 220
               H    R G   GS PR R GH  H
Sbjct: 282 G-GRHGGHGRHGSCSGS-PRGRHGHGGH 307



 Score = 31.1 bits (67), Expect = 0.96
 Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
 Frame = -3

Query: 456 RGRELPGGEQHQGRHQHERARQNHCVEGRGGHSRAHGLRAVRHAEGAGQQQRSLPVHTER 277
           RG    G  +H       R R  H   G GGH    G    RH  G     R    H   
Sbjct: 281 RGGRHGGHGRHGSCSGSPRGRHGH--GGHGGHGSRSGSPGGRHGHGGSGHHRG-GRHGGH 337

Query: 276 ARQGLQVGSVPRDRGH-RRHTQVH 208
            R G + GS     GH  RH   H
Sbjct: 338 GRHGSRSGSPGGRHGHGGRHGPPH 361


>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
           protein F58H1.1b protein.
          Length = 1145

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
 Frame = -1

Query: 404 NGLVKTIVSR-DGVATPVHMDFVQYDTQKGR--------DNNSGAYLFIPSGPAKGFKSD 252
           NG++K   S  D     ++  F+ Y  +K +        DN +GAYLF+P G A+  K  
Sbjct: 769 NGMIKRATSLVDDKPIDLNSHFIHYGARKSKRKFANGNEDNPAGAYLFLPDGEARELKKQ 828

Query: 251 PYPEIVV 231
               I+V
Sbjct: 829 SSDWILV 835


>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
           protein F58H1.1a protein.
          Length = 1143

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
 Frame = -1

Query: 404 NGLVKTIVSR-DGVATPVHMDFVQYDTQKGR--------DNNSGAYLFIPSGPAKGFKSD 252
           NG++K   S  D     ++  F+ Y  +K +        DN +GAYLF+P G A+  K  
Sbjct: 767 NGMIKRATSLVDDKPIDLNSHFIHYGARKSKRKFANGNEDNPAGAYLFLPDGEARELKKQ 826

Query: 251 PYPEIVV 231
               I+V
Sbjct: 827 SSDWILV 833


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 21/79 (26%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
 Frame = -3

Query: 441 PGGEQHQGRHQHERARQNHCVEGRGGHSRAHGLRAVRHAEGAGQQQRSLPVHTERARQGL 262
           P    H G H H  A   H      GH  +HG+    H E  G    +   H      G+
Sbjct: 558 PAHHGHHGEHHHAPAHHGH-----HGHHGSHGVHHGHH-ESHGHGHHAPAHHGHHGEHGV 611

Query: 261 QVGSVPRDRG-HRRHTQVH 208
             G      G H  H   H
Sbjct: 612 HHGHHGAGYGAHHGHHGAH 630


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,176,528
Number of Sequences: 27780
Number of extensions: 326915
Number of successful extensions: 1079
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)