Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_L13
         (865 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    32   1.2  
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    32   1.2  
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    32   1.2  

>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p
           protein.
          Length = 846

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 25/109 (22%), Positives = 27/109 (24%)
 Frame = +1

Query: 346 PXXXXXXPXXXXPPXAXXXXXAXXPXPXXPPXXXXXAXXPPXXXRXXXSPGSXCXXRAPX 525
           P      P    PP A     +  P P  PP        PP        P        P 
Sbjct: 96  PPPRPASPKVEPPPPAPPGVESP-PGPQ-PPASPRFDPPPPHTIEPPPPPAPPTLVPPPP 153

Query: 526 XXPPXPXPPXRXVXXRXXXXPXXPXXARXXXXPAXXRPXPXRXXXPPXP 672
             PP   PP           P  P        P    P P +   PP P
Sbjct: 154 PAPPTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPP 202


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
           isoform A protein.
          Length = 1109

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 25/109 (22%), Positives = 27/109 (24%)
 Frame = +1

Query: 346 PXXXXXXPXXXXPPXAXXXXXAXXPXPXXPPXXXXXAXXPPXXXRXXXSPGSXCXXRAPX 525
           P      P    PP A     +  P P  PP        PP        P        P 
Sbjct: 359 PPPRPASPKVEPPPPAPPGVESP-PGPQ-PPASPRFDPPPPHTIEPPPPPAPPTLVPPPP 416

Query: 526 XXPPXPXPPXRXVXXRXXXXPXXPXXARXXXXPAXXRPXPXRXXXPPXP 672
             PP   PP           P  P        P    P P +   PP P
Sbjct: 417 PAPPTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPP 465


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
           isoform B protein.
          Length = 1150

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 25/109 (22%), Positives = 27/109 (24%)
 Frame = +1

Query: 346 PXXXXXXPXXXXPPXAXXXXXAXXPXPXXPPXXXXXAXXPPXXXRXXXSPGSXCXXRAPX 525
           P      P    PP A     +  P P  PP        PP        P        P 
Sbjct: 359 PPPRPASPKVEPPPPAPPGVESP-PGPQ-PPASPRFDPPPPHTIEPPPPPAPPTLVPPPP 416

Query: 526 XXPPXPXPPXRXVXXRXXXXPXXPXXARXXXXPAXXRPXPXRXXXPPXP 672
             PP   PP           P  P        P    P P +   PP P
Sbjct: 417 PAPPTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPP 465


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,874,617
Number of Sequences: 53049
Number of extensions: 210592
Number of successful extensions: 521
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)