Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_L12
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.4  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   7.4  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   7.4  

>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -3

Query: 511 GGASCGGEAVASAVRRLAGCLDTRTEPRSCDDKRPAVETG 392
           GGASCG       V+RL   L    +    +D  P +  G
Sbjct: 69  GGASCGPNVYNRGVQRLEAMLFAVDQINRDEDILPGITIG 108


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 604 NIPSASGEDYVHDHELV 554
           ++P   GE+Y++ H+L+
Sbjct: 250 DLPDYRGEEYLYSHKLL 266


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 604 NIPSASGEDYVHDHELV 554
           ++P   GE+Y++ H+L+
Sbjct: 250 DLPDYRGEEYLYSHKLL 266


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 360 PDAFRCRPPNTSRPPSLH 307
           P+A+R RPP   R  S H
Sbjct: 171 PNAYRLRPPLNPRFGSTH 188


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 360 PDAFRCRPPNTSRPPSLH 307
           P+A+R RPP   R  S H
Sbjct: 171 PNAYRLRPPLNPRFGSTH 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,850
Number of Sequences: 438
Number of extensions: 3152
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)