Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_L09
(795 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 25 0.81
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 25 1.1
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 23 2.5
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 23 4.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.3
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 5.7
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 22 5.7
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 22 7.5
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 22 7.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 10.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 10.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 10.0
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 25.0 bits (52), Expect = 0.81
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 560 NGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCV 417
NG C+ +C A + S C C DG +L D +C+ S V
Sbjct: 40 NGHCSHLCLPAPRINSKSPLLSCACPDGLKLL-SDGLMCVEKVSTTIV 86
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 560 NGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCL 441
NG C+ +C A + S C C DG +L D +C+
Sbjct: 40 NGHCSHLCLPAPRINSKSPLLSCACPDGLKLL-SDGLMCV 78
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 23.4 bits (48), Expect = 2.5
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 236 NNTACSANCSAGGEECGLGS--GCPSEQTHF 150
N++AC+ANC + G+ G GC +T F
Sbjct: 56 NDSACAANCLSLGKAGGHCEKVGCICRKTSF 86
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 236 NNTACSANCSAGGEECG 186
N++AC+ANC + G+ G
Sbjct: 31 NDSACAANCHSLGKAGG 47
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = -2
Query: 665 YKNIDDVCVPQCLDCRNGECVAPNDCLCHD 576
Y+ D V QC+ CR G C D
Sbjct: 615 YQIRDHKDVTQCISCRQGTVPDETHSACRD 644
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 5.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 497 KCTCDDGYRLSPEDP 453
+C CD GY + +DP
Sbjct: 295 ECRCDPGYFRAEKDP 309
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 236 NNTACSANCSAGGEECG 186
N++AC+ANC + G+ G
Sbjct: 56 NDSACAANCLSLGKAGG 72
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 21.8 bits (44), Expect = 7.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 365 RNDTNSNVCYKKCDGACE 312
R SN + +CDG C+
Sbjct: 34 RGKCPSNEIFSRCDGRCQ 51
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 21.8 bits (44), Expect = 7.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 365 RNDTNSNVCYKKCDGACE 312
R SN + +CDG C+
Sbjct: 34 RGKCPSNEIFSRCDGRCQ 51
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 10.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 323 GACENGRCSLDGACECDSGYILSNGTCIRNNTACSA 216
G+C G C+ G + SN IR T C A
Sbjct: 532 GSCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKA 567
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 10.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 323 GACENGRCSLDGACECDSGYILSNGTCIRNNTACSA 216
G+C G C+ G + SN IR T C A
Sbjct: 532 GSCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKA 567
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 10.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 323 GACENGRCSLDGACECDSGYILSNGTCIRNNTACSA 216
G+C G C+ G + SN IR T C A
Sbjct: 532 GSCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKA 567
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,829
Number of Sequences: 438
Number of extensions: 4224
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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