Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_L03
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    31   0.96 
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    31   0.96 
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    29   5.1  

>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
           protein C46C2.1b protein.
          Length = 1677

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -1

Query: 644 TNHXRXNIHFHQSPXXVXEGVRAGVKPP-LSSEAPSAYLTPSSLGMANGVSP 492
           TNH   N H  + P  +  G   G  PP L S   +A  TP   G A  +SP
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISGKAGPMSP 198


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
           protein C46C2.1a protein.
          Length = 1838

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -1

Query: 644 TNHXRXNIHFHQSPXXVXEGVRAGVKPP-LSSEAPSAYLTPSSLGMANGVSP 492
           TNH   N H  + P  +  G   G  PP L S   +A  TP   G A  +SP
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISGKAGPMSP 198


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -1

Query: 590 EGVRAGVKPPLSSEAPSAYLTPSSLGMANGVSPPYFQVNDESQASRLISRHSTHT 426
           EG    ++   SS +PS + TP  +G  + VS    Q +  S +S   +   T T
Sbjct: 734 EGTTLSIESTESSASPSDFTTPDFIGFTSSVSRTSEQYSSSSPSSDTTTMDVTST 788


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,149,702
Number of Sequences: 27780
Number of extensions: 270900
Number of successful extensions: 814
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)