Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_K19
         (819 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    48   6e-06
Z72506-3|CAA96617.1|  310|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical ...    28   7.0  
U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine recept...    28   9.2  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    28   9.2  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
 Frame = -1

Query: 522 EAVXXELQRQFEXCGNTGXIXYGQFT-LPESCCVKKSILSTFAGNNCTVDAANPGCGPKI 346
           E+   +  + FE CG T    +  FT +P+SCC+++  +   A  N  +    PGC   +
Sbjct: 132 ESAWDKTHQLFECCGVTNSSDWLTFTTIPDSCCIEE--IEGCARENAPL--FEPGCIHSV 187

Query: 345 GELYQKWNKPIAGVALGVACVEVVGALFALCLANSI 238
            +   K    + G+   +A +++VG  FA CL+ SI
Sbjct: 188 EQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223


>Z72506-3|CAA96617.1|  310|Caenorhabditis elegans Hypothetical
           protein F07A5.2 protein.
          Length = 310

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -2

Query: 437 SPVASRRA--SXLPSPATTARSTPRIPAAVPRSASSTRNGT 321
           +P +SRR+      S  ++++S PRI + +PRS+SS  +GT
Sbjct: 41  TPSSSRRSRLDSFLSTTSSSKSRPRIKSKLPRSSSSGFSGT 81


>AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical
           protein T10D4.6 protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 440 PSPVASRRASXLPSPATTARSTPRIPAAVPRSASSTRN 327
           P PVAS   S  P+   +A ++P++PA     +S +R+
Sbjct: 623 PPPVASSSCSPYPALLASADASPQVPAWASARSSISRS 660


>U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformd protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 239 MELARHSANRAPTTSTQATPR 301
           M ++RH + R+ TT+T ATPR
Sbjct: 1   MTVSRHYSRRSTTTTTTATPR 21


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 239 MELARHSANRAPTTSTQATPR 301
           M ++RH + R+ TT+T ATPR
Sbjct: 249 MTVSRHYSRRSTTTTTTATPR 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,062,963
Number of Sequences: 27780
Number of extensions: 226263
Number of successful extensions: 724
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)