Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_K15
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 44 1e-06
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 44 1e-06
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 34 0.001
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 27 0.25
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 21 9.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 44.4 bits (100), Expect = 1e-06
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -1
Query: 201 WFQ-TGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFGSEK 55
W++ G+ + + +++L SGEL++S+L D +YTCQ ENA G++K
Sbjct: 1345 WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQGNDK 1394
Score = 27.5 bits (58), Expect = 0.14
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -1
Query: 240 RSRGHPKPQXX---STWFQTGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENA 70
+++G P P +T ++G+ + + K+L +G L++ + Y CQA N
Sbjct: 732 QAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNG 791
Query: 69 FGS 61
GS
Sbjct: 792 IGS 794
Score = 26.2 bits (55), Expect = 0.33
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 135 ELVISSLLWSDMDEYTCQAENAFGSEK 55
+L ISS SD Y CQA N +G ++
Sbjct: 871 QLQISSAEASDSGAYFCQASNLYGRDQ 897
Score = 25.0 bits (52), Expect = 0.77
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 231 GHPKPQXXSTWFQTGQNVPIEKNPRMK--VLRSGELV----ISSLLWSDMDEYTCQAENA 70
G+P PQ TW G +P + V G+++ IS ++ D EY+C AEN
Sbjct: 447 GNPTPQV--TWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENR 504
Query: 69 FG 64
G
Sbjct: 505 AG 506
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 44.4 bits (100), Expect = 1e-06
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -1
Query: 201 WFQ-TGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFGSEK 55
W++ G+ + + +++L SGEL++S+L D +YTCQ ENA G++K
Sbjct: 1341 WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQGNDK 1390
Score = 27.5 bits (58), Expect = 0.14
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -1
Query: 240 RSRGHPKPQXX---STWFQTGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENA 70
+++G P P +T ++G+ + + K+L +G L++ + Y CQA N
Sbjct: 728 QAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNG 787
Query: 69 FGS 61
GS
Sbjct: 788 IGS 790
Score = 26.2 bits (55), Expect = 0.33
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 135 ELVISSLLWSDMDEYTCQAENAFGSEK 55
+L ISS SD Y CQA N +G ++
Sbjct: 867 QLQISSAEASDSGAYFCQASNLYGRDQ 893
Score = 25.0 bits (52), Expect = 0.77
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 231 GHPKPQXXSTWFQTGQNVPIEKNPRMK--VLRSGELV----ISSLLWSDMDEYTCQAENA 70
G+P PQ TW G +P + V G+++ IS ++ D EY+C AEN
Sbjct: 447 GNPTPQV--TWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENR 504
Query: 69 FG 64
G
Sbjct: 505 AG 506
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 231 GHPKPQXXSTWFQTGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFGSE 58
G P P+ TW G ++ + R++ L G L I + +D EY+C EN FG +
Sbjct: 1302 GVPAPEV--TWKVRG--AVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFGHD 1355
Score = 25.0 bits (52), Expect = 0.77
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 144 RSGELVISSLLWSDMDEYTCQAENAFGSEKAKT 46
R L+IS + EY C AENA G+ T
Sbjct: 639 RVSMLMISVITARHAGEYVCTAENAAGTASHST 671
Score = 25.0 bits (52), Expect = 0.77
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -1
Query: 159 RMKVLRSG---ELVISSLLWSDMDEYTCQAENAFGSE 58
R ++L +G +L I SD +TC A NAFGS+
Sbjct: 828 REEILANGVLSDLSIKRTERSDSALFTCVATNAFGSD 864
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 26.6 bits (56), Expect = 0.25
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = -1
Query: 219 PQXXSTWFQTGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQA 79
P W + G ++ P ++V G L ++ + YTC A
Sbjct: 338 PPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHA 384
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 242 RVQGDTPSPKXDQPGFKXDRMCPLKR 165
R G TP K + F +++ LKR
Sbjct: 12 RGNGGTPEEKRPRTAFSGEQLARLKR 37
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,593
Number of Sequences: 438
Number of extensions: 1505
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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