Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_K12
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual 34 0.026
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 29 0.56
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 28 1.3
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 28 1.3
SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit Rpn10|... 27 2.3
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 2.3
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 26 5.2
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 26 6.9
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 6.9
>SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 272
Score = 33.9 bits (74), Expect = 0.026
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -2
Query: 627 PVFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYM--WNVEARN 454
P+F T +GK+ V IC+ + NGA+++ +A + Y W++ +
Sbjct: 136 PIFETSFGKLGVMICWDTAFPEVARIHALNGADLL-----VVATNWENPYSDDWDLVTKA 190
Query: 453 AAITNCYFTAAINRVG 406
A NC A NRVG
Sbjct: 191 RAFENCIPLVAANRVG 206
Score = 30.3 bits (65), Expect = 0.32
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 338 FYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMTQRL-DMYVNSLS 165
F+G S GP G L ++G++ VDL+ + +R + R+ D+Y LS
Sbjct: 213 FFGHSKIIGPTGKVIKALDEEKEGVISYTVDLDDAKPLRKNYYTFFEDRMPDLYKRLLS 271
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 29.5 bits (63), Expect = 0.56
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = -3
Query: 521 LIRQRRSPEKAAASTCGTLKLGTQLSRTATSQRPSTESAXEEFPNEFTSADGKPAHKDLG 342
+++ S + S+ G+ T S ++ S S S +TSA G AH G
Sbjct: 417 IVQATISQSSTSGSSSGSSSASTTASSSSVSSGSSISSGSSSMSTSYTSASGSSAHSS-G 475
Query: 341 LFYGSS 324
GSS
Sbjct: 476 SSSGSS 481
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = -2
Query: 675 AILTNPTTXMEGNTGHP--VFATRYGK-IAVNICFGRHHVLNWMMFGQNGAEIVFNPSAT 505
A NP+ M G P V+ G+ A + G H++ +FG +G+E+ F T
Sbjct: 44 AAAINPSDLMNATGGFPYTVYPRIVGRDYAGTVISGASHLVGTRVFGTSGSELSFTKDGT 103
Query: 504 IA 499
A
Sbjct: 104 HA 105
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 557 QFKTWCRPKQMFTAILPYLVANTGWPVLPSM-XVVGFVKIADSRNVVLAM 703
+F T K +FTA+ P+L A T + ++PS G V + R VL +
Sbjct: 1521 RFPTRVLCKPVFTAVPPFLFAGTDFALIPSRDEPFGLVAVEFGRKGVLCI 1570
>SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit
Rpn10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 440 FVIAAFLASTFHMYSLPPSPAIVAD 514
F+ AA + + H+ S+PPSP +++D
Sbjct: 156 FIDAANSSDSCHLVSIPPSPQLLSD 180
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 446 SRTATSQRPSTESAXEEFPNEFTSADGKPAHKD 348
S+T S S SA +FP EF +A AH +
Sbjct: 256 SQTRRSSWSSIASAFNDFPEEFPNASNPEAHSN 288
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 434 TSQRPSTESAXEEFPNEFTSADGKPAHKDLGLFYGS 327
+S R + A +F + F+ + KP+ KDL LF+G+
Sbjct: 145 SSSRLLSTDAFSQFISSFSPPE-KPSMKDLALFHGN 179
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 565 DVVPSEADVHRDLAVSGREYRMAGVTFH 648
DVVP A R L + Y AG TFH
Sbjct: 25 DVVPKTAANFRALCTGEKGYGYAGSTFH 52
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -3
Query: 500 PEKAAASTCGTLKLGTQLSRTATSQRPSTESAXEEFPNEF 381
P + A T T KL + A+ +RP E P +F
Sbjct: 434 PNRLTAETVDTNKLTASKEQIASPKRPGPSDNGNEIPTKF 473
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,904,086
Number of Sequences: 5004
Number of extensions: 56908
Number of successful extensions: 158
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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