Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_K04
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 36 0.14
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 36 0.14
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 36 0.14
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 36 0.14
U81554-1|AAB66908.1| 239|Homo sapiens CaM kinase II isoform pro... 31 6.9
BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein. 31 6.9
BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal recog... 31 6.9
BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein LO... 31 6.9
BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein. 31 6.9
BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein. 31 6.9
BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein. 31 6.9
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 30 9.1
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 30 9.1
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 30 9.1
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 30 9.1
AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive dom... 30 9.1
AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens ... 30 9.1
AK055141-1|BAB70862.1| 260|Homo sapiens protein ( Homo sapiens ... 30 9.1
AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens ... 30 9.1
AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens ... 30 9.1
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 30 9.1
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 30 9.1
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 30 9.1
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 30 9.1
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 30 9.1
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 36.3 bits (80), Expect = 0.14
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = -1
Query: 497 SSRRKSILTPLESSKWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPN 321
SS S+ +E+ + GA + KK + + P G G KLP N
Sbjct: 453 SSDSMSLKVDVEALENSAGATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKN 510
Query: 320 ADLSKPPDPERWLPKYERTAY 258
D PDPERWLP ER+ Y
Sbjct: 511 YDPKVTPDPERWLPMRERSYY 531
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 440 DPEKAKALSKHLPSSDSMSLKVDVEA 465
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 36.3 bits (80), Expect = 0.14
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = -1
Query: 497 SSRRKSILTPLESSKWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPN 321
SS S+ +E+ + GA + KK + + P G G KLP N
Sbjct: 508 SSDSMSLKVDVEALENSAGATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKN 565
Query: 320 ADLSKPPDPERWLPKYERTAY 258
D PDPERWLP ER+ Y
Sbjct: 566 YDPKVTPDPERWLPMRERSYY 586
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 495 DPEKAKALSKHLPSSDSMSLKVDVEA 520
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 36.3 bits (80), Expect = 0.14
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = -1
Query: 497 SSRRKSILTPLESSKWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPN 321
SS S+ +E+ + GA + KK + + P G G KLP N
Sbjct: 508 SSDSMSLKVDVEALENSAGATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKN 565
Query: 320 ADLSKPPDPERWLPKYERTAY 258
D PDPERWLP ER+ Y
Sbjct: 566 YDPKVTPDPERWLPMRERSYY 586
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 495 DPEKAKALSKHLPSSDSMSLKVDVEA 520
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 36.3 bits (80), Expect = 0.14
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = -1
Query: 497 SSRRKSILTPLESSKWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPN 321
SS S+ +E+ + GA + KK + + P G G KLP N
Sbjct: 508 SSDSMSLKVDVEALENSAGATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPKN 565
Query: 320 ADLSKPPDPERWLPKYERTAY 258
D PDPERWLP ER+ Y
Sbjct: 566 YDPKVTPDPERWLPMRERSYY 586
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 495 DPEKAKALSKHLPSSDSMSLKVDVEA 520
>U81554-1|AAB66908.1| 239|Homo sapiens CaM kinase II isoform
protein.
Length = 239
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 181 DPEKAKALSKHLPSSDSMSLKVDVEA 206
>BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein.
Length = 560
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 495 DPEKAKALSKHLPSSDSMSLKVDVEA 520
>BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal
recognition particle 72kDa protein.
Length = 559
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 495 DPEKAKALSKHLPSSDSMSLKVDVEA 520
>BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein
LOC339344 protein.
Length = 399
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Frame = -2
Query: 394 PELPALSWDRRRKRNASATANSRRTQTS------PNLPIRKGGCQSTSELRTESDEALD- 236
P+ LS DRR R A +A+S+ +S P+ ++GGC E + AL
Sbjct: 151 PQRYVLSEDRREDRRADTSAHSKAGSSSPEPWARPSCTPQEGGCPRPKERESPPPSALQP 210
Query: 235 VASSRVAKECPP 200
V R+A PP
Sbjct: 211 VQLPRLALSPPP 222
>BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 495 DPEKAKALSKHLPSSDSMSLKVDVEA 520
>BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 495 DPEKAKALSKHLPSSDSMSLKVDVEA 520
>BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 546 DPPRARSLAEQLPPXDQLETKIDIDA 469
DP +A++L++ LP D + K+D++A
Sbjct: 495 DPEKAKALSKHLPSSDSMSLKVDVEA 520
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1883
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1283
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1883
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1283
>AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive domain
1A (SWI- like) isoform a variant protein.
Length = 1181
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 741 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 779
>AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens
cDNA FLJ90459 fis, clone NT2RP3001754. ).
Length = 754
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 314 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 352
>AK055141-1|BAB70862.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ30579 fis, clone BRAWH2006989, weakly similar to
DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC
2.7.7.6). ).
Length = 260
Score = 30.3 bits (65), Expect = 9.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 134 SWQRSPG*AWSAVYSCHIDPWQWW 205
SW SP +++S H PW WW
Sbjct: 174 SWSHSPHSRSHSLWSSHSSPWFWW 197
>AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens
cDNA FLJ14749 fis, clone NT2RP3002876, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 613
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 173 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 211
>AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens
cDNA FLJ14536 fis, clone NT2RM2001105, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 527
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 87 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 125
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA1 protein.
Length = 1999
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1559 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1597
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1283
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein p270
protein.
Length = 1927
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1487 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1525
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor 250a
protein.
Length = 2285
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1883
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling factor
p250 protein.
Length = 1939
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 295 RKGGCQSTSELRTESDEALDVASSRVAKECPPLPRINMT 179
R GG +T ++T + ++ SR CPP PR ++T
Sbjct: 1499 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVT 1537
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,925,766
Number of Sequences: 237096
Number of extensions: 1443372
Number of successful extensions: 4336
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4297
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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