Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_J11
         (778 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).  pr...    30   8.1  
AK127657-1|BAC87075.1|  266|Homo sapiens protein ( Homo sapiens ...    30   8.1  

>AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).
           protein.
          Length = 377

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
 Frame = +1

Query: 316 SPSATCADSQDILPPCKLLTATNLTSHHANY----NFTGSTSLTRCYSHTEEANRE--HL 477
           S S TC+ +  +  P  L    +  SH   +      T S      +SHT        HL
Sbjct: 88  SHSHTCSHTHSLTCPHTLAPTRHTHSHACTHPHVQTHTASAYTFTTHSHTPGHTHSCSHL 147

Query: 478 SSTHKHALHRKNLHPPAEPEH 540
             TH HA    + HPP  P H
Sbjct: 148 IHTHSHA----HSHPPNAPTH 164


>AK127657-1|BAC87075.1|  266|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45755 fis, clone MESAN2007032. ).
          Length = 266

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
 Frame = +2

Query: 314 SHLRLPVQTHKTFYHHANFLPQQILPATTQTTILRVPPL-LHDVTPTLRKPTANTCQART 490
           S  RLP  T       AN +P+         + LR P   LH  T +LR PT++ C A +
Sbjct: 34  SAYRLPHLTRGLGAREANQVPELTDSFRPPASSLRPPTSSLHPPTSSLRPPTSSLCPATS 93

Query: 491 S---THFTGKTCIRQRNPNTAASPDTNAPDVLSYRSRRLQNVSIFLPRGNLLAFLFACLL 661
           S   ++      I    P +++ P +N   +L   S  L   S  LP  + L  L + +L
Sbjct: 94  SPLPSNLLPPPSISSLCPASSSPPPSN---LLPPPSNLLPPPSNLLPPPSALLPLPSSVL 150

Query: 662 EP 667
            P
Sbjct: 151 PP 152


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,524,399
Number of Sequences: 237096
Number of extensions: 2853395
Number of successful extensions: 12602
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12595
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)