Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_I20
         (766 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.77 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.4  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   7.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.5  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +2

Query: 398 EQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHRIRFVDACANAQQEA 544
           EQH  +  +      S+QSQ   H R+     QH+       +  QQ A
Sbjct: 199 EQHMMYQQQQQSQAASQQSQPGMHPRQQQQAQQHQGVVTSPLSQQQQAA 247



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -1

Query: 229 GVHLRGPQPLLGHHQHIPVHSDH 161
           G     P P +GH  H P  + H
Sbjct: 109 GYRSASPSPGMGHMGHTPTPNGH 131


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 59  ENQKEKKSCFNREYSRLKWNM 121
           +N  + K C N+EY  +K N+
Sbjct: 198 KNDPDSKECSNQEYEIMKDNL 218


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/62 (17%), Positives = 26/62 (41%)
 Frame = +2

Query: 416 HGEVPLGLQSEQSQAQAHGRRYANCHQHRIRFVDACANAQQEALRRREDDQEYEVRRSFA 595
           H E  L  +  + Q Q   ++     Q + + V      QQ+  ++++  Q+ + ++   
Sbjct: 402 HSEKLLAFKMTEQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQ 461

Query: 596 SH 601
            H
Sbjct: 462 QH 463


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 518 RLRSGCGADGSW 483
           RLR+GC AD  W
Sbjct: 378 RLRNGCPADWLW 389


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 242 LYLCLPPIISWVSY 283
           L L LPP+  W SY
Sbjct: 27  LSLSLPPLFGWGSY 40


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 445 RTESGPGTRPPLCQL 489
           R  +G GTR  +CQL
Sbjct: 668 RLPNGEGTRADICQL 682


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,348
Number of Sequences: 438
Number of extensions: 3666
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)