Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_I09
(832 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 231 4e-61
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 224 6e-59
03_03_0146 - 14835236-14835445,14835525-14835714,14836740-14837269 31 1.5
04_04_0148 - 23114000-23114113,23114215-23114350,23114813-231149... 30 2.0
07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803... 29 3.4
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 29 3.4
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 29 3.4
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 7.9
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 28 7.9
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 231 bits (566), Expect = 4e-61
Identities = 107/153 (69%), Positives = 124/153 (81%)
Frame = -2
Query: 675 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 496
PRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295
Query: 495 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 316
+ A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL T R AL
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
Query: 315 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 217
E+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 356 EEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 815 EWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQ 720
++ + EK IPVD+VF +DEMID IGVT+G+
Sbjct: 196 DYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGK 227
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 727 KGKGYKGVTSRWHTKKLP 674
KGKGY+GV +RW +LP
Sbjct: 225 KGKGYEGVVTRWGVTRLP 242
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 224 bits (548), Expect = 6e-59
Identities = 103/145 (71%), Positives = 120/145 (82%)
Frame = -2
Query: 675 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 496
PRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295
Query: 495 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 316
+ A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL T R AL
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
Query: 315 EKINLKFIDTSSKFGHGRFQTPADK 241
E+I LKFIDTSSKFGHGRFQT +K
Sbjct: 356 EEIKLKFIDTSSKFGHGRFQTTDEK 380
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 815 EWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQ 720
++ + EK IPVD+VF +DEMID IGVT+G+
Sbjct: 196 DYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGK 227
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 727 KGKGYKGVTSRWHTKKLP 674
KGKGY+GV +RW +LP
Sbjct: 225 KGKGYEGVVTRWGVTRLP 242
>03_03_0146 - 14835236-14835445,14835525-14835714,14836740-14837269
Length = 309
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 42 WAPRRDTLERPRPAARAHGA 101
WA RR RPRPA RA GA
Sbjct: 102 WAERRAASRRPRPAPRAEGA 121
>04_04_0148 -
23114000-23114113,23114215-23114350,23114813-23114912,
23115003-23115113,23115197-23115234,23115359-23115429,
23116998-23117176,23117272-23117389
Length = 288
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 782 PVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATPVRHTRVLGK 645
P +F + CIG G +I R + H +++PVR+ LGK
Sbjct: 153 PTIPIFGVCMGLQCIGEAFGGKIIRAPSGVMHGKSSPVRYDEELGK 198
>07_03_0685 -
20679883-20679927,20680034-20680087,20680179-20680390,
20680476-20680550,20683094-20683168,20686196-20686264,
20686349-20686502,20686577-20686654,20689102-20689194,
20689491-20689640,20690134-20690268,20691009-20691098,
20691412-20691453,20691796-20692053,20692131-20692207,
20693126-20693186,20693687-20693905,20694936-20695208,
20695314-20695505,20695841-20696011
Length = 840
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -3
Query: 815 EWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATPVRHTRVLGKLPA 636
+WA+ H++ + + S FA+ E+ + G R++ FS ++P+R RV +P
Sbjct: 13 KWAKAHIDLVVGLQSRFARLEL------SNGLRLRLLRFSFPSPSSSPLRWVRVGNLVPL 66
Query: 635 LE 630
E
Sbjct: 67 NE 68
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 474 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 379
D + + +P+GG P YG ++ D + C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 750 D*LHWCHPRAKDTKVSLLVGTQRSYPRKTHKGLRKVACIGAWHPSRVSFTVAR 592
D L +PR + ++VS ++RS PR R GAW+P SFT+ R
Sbjct: 565 DGLQCAYPRRRSSRVSAT--SRRSKPR------RSSVSAGAWNPRSPSFTIKR 609
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = -2
Query: 618 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 469
++V F + GY H + +N ++ I G IH+ D + E L
Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419
Query: 468 SEKSITPMGGFPHYGEVNN 412
SEKS P+ FP V++
Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438
>08_01_0332 +
2971361-2971439,2971596-2971783,2971985-2972062,
2972354-2972425,2972513-2972631,2972858-2972942,
2973096-2973185,2973268-2973369,2973448-2973624,
2973874-2973954,2974511-2974582,2974662-2974756,
2974831-2974919,2975016-2975078,2975161-2975204,
2975554-2975685
Length = 521
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 103 FFFFFFALSNVYFHGLHLRL 162
FFFFFF +N+ FH L+ L
Sbjct: 307 FFFFFFFCANILFHHLNYLL 326
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,839,865
Number of Sequences: 37544
Number of extensions: 515850
Number of successful extensions: 1305
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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