Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_H14
         (766 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18761-1|AAB52371.1|  424|Homo sapiens nuclear factor I protein.       31   6.0  
U18759-1|AAB52369.1|  433|Homo sapiens nuclear factor I protein.       31   6.0  
L31881-1|AAA53422.1|  441|Homo sapiens nuclear factor I-X protein.     31   6.0  
BX537794-1|CAD97845.1|  403|Homo sapiens hypothetical protein pr...    31   6.0  
BT019732-1|AAV38537.1|  441|Homo sapiens nuclear factor I/X (CCA...    31   6.0  
BC117115-1|AAI17116.1|  440|Homo sapiens NFIX protein protein.         31   6.0  
BC117113-1|AAI17114.1|  440|Homo sapiens NFIX protein protein.         31   6.0  
AC007787-2|AAD38240.1|  255|Homo sapiens nuclear factor I-X prot...    31   6.0  
AC007787-1|AAD38241.1|  316|Homo sapiens NFI-X3 protein.               31   6.0  

>U18761-1|AAB52371.1|  424|Homo sapiens nuclear factor I protein.
          Length = 424

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 681 STXIIKSXIPYTNHPRXNIHFHQSPDAVXEGVR 583
           ST II+   PY  HP    H H   D++ E V+
Sbjct: 372 STSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQ 404


>U18759-1|AAB52369.1|  433|Homo sapiens nuclear factor I protein.
          Length = 433

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 681 STXIIKSXIPYTNHPRXNIHFHQSPDAVXEGVR 583
           ST II+   PY  HP    H H   D++ E V+
Sbjct: 365 STSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQ 397


>L31881-1|AAA53422.1|  441|Homo sapiens nuclear factor I-X protein.
          Length = 441

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 681 STXIIKSXIPYTNHPRXNIHFHQSPDAVXEGVR 583
           ST II+   PY  HP    H H   D++ E V+
Sbjct: 373 STSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQ 405


>BX537794-1|CAD97845.1|  403|Homo sapiens hypothetical protein
           protein.
          Length = 403

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 681 STXIIKSXIPYTNHPRXNIHFHQSPDAVXEGVR 583
           ST II+   PY  HP    H H   D++ E V+
Sbjct: 335 STSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQ 367


>BT019732-1|AAV38537.1|  441|Homo sapiens nuclear factor I/X
           (CCAAT-binding transcription factor) protein.
          Length = 441

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 681 STXIIKSXIPYTNHPRXNIHFHQSPDAVXEGVR 583
           ST II+   PY  HP    H H   D++ E V+
Sbjct: 373 STSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQ 405


>BC117115-1|AAI17116.1|  440|Homo sapiens NFIX protein protein.
          Length = 440

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 681 STXIIKSXIPYTNHPRXNIHFHQSPDAVXEGVR 583
           ST II+   PY  HP    H H   D++ E V+
Sbjct: 372 STSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQ 404


>BC117113-1|AAI17114.1|  440|Homo sapiens NFIX protein protein.
          Length = 440

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 681 STXIIKSXIPYTNHPRXNIHFHQSPDAVXEGVR 583
           ST II+   PY  HP    H H   D++ E V+
Sbjct: 372 STSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQ 404


>AC007787-2|AAD38240.1|  255|Homo sapiens nuclear factor I-X
           protein.
          Length = 255

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 681 STXIIKSXIPYTNHPRXNIHFHQSPDAVXEGVR 583
           ST II+   PY  HP    H H   D++ E V+
Sbjct: 187 STSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQ 219


>AC007787-1|AAD38241.1|  316|Homo sapiens NFI-X3 protein.
          Length = 316

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 681 STXIIKSXIPYTNHPRXNIHFHQSPDAVXEGVR 583
           ST II+   PY  HP    H H   D++ E V+
Sbjct: 187 STSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQ 219


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,624,055
Number of Sequences: 237096
Number of extensions: 1726682
Number of successful extensions: 4229
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4229
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)