Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_H12
(762 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0510 - 3794793-3795047,3796005-3796295,3796850-3796906,379... 48 8e-06
03_06_0502 - 34384285-34384503,34384595-34384755,34384854-343849... 36 0.035
02_05_0704 - 31064996-31065214,31065306-31065466,31065583-310656... 35 0.081
08_02_0575 - 18876988-18877029,18877072-18877102,18878290-188784... 33 0.25
03_06_0039 + 31235840-31236214,31237057-31237674 30 1.7
11_08_0029 - 27783907-27784310,27784418-27786616,27786751-27787333 30 2.3
03_06_0040 + 31240164-31241102,31241280-31241897 29 5.3
03_06_0037 + 31222963-31223886,31225172-31225786 29 5.3
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 28 7.1
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 28 7.1
10_08_0810 + 20734490-20734606,20735182-20735433,20735521-207356... 28 9.3
07_03_0901 + 22433920-22434048,22434201-22434872 28 9.3
04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912 28 9.3
03_06_0038 + 31227349-31227621,31228120-31228212,31229439-312295... 28 9.3
02_04_0489 + 23404757-23404812,23406170-23406296,23406418-234064... 28 9.3
01_06_1745 - 39609894-39610030,39610127-39610223,39613856-396139... 28 9.3
>07_01_0510 -
3794793-3795047,3796005-3796295,3796850-3796906,
3797021-3797055,3797132-3797172,3798020-3798519
Length = 392
Score = 48.0 bits (109), Expect = 8e-06
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Frame = -2
Query: 686 GTNIRKQGCHYGCSNPHPHCQIWASSFLPNEPRIKDRCQSEYYAKYGNSLLVDYLKQELK 507
G + G G S H H Q+ + F+P + C E + + G L ++ +++
Sbjct: 210 GMVFKNHGASAGASMAHSHSQMLGTPFVPPSVTTRLNCMKEVFERLGKCSLCEFQSKDIL 269
Query: 506 LKERIVLKNSEWVAIVPYWAVWPYETMLLPLNGA-------PQRLTDLNPAQKKGLAEIM 348
++E + AIVP+ A +P+E ++P + DL + LA++
Sbjct: 270 VRE-----THNFSAIVPFAASYPFEIWIIPRQHSSYFHEIDKDTALDLGSLLRTMLAKLS 324
Query: 347 KQLNTKYDNLFECSFPYSM 291
KQLN N S P+ +
Sbjct: 325 KQLNDPPFNFMIHSAPFGV 343
>03_06_0502 -
34384285-34384503,34384595-34384755,34384854-34384931,
34385444-34385595,34385645-34385703,34385808-34385894,
34385990-34386086,34386232-34386416,34386494-34386553,
34386640-34386715,34386824-34386924,34387039-34387215,
34387302-34387399,34387505-34387604
Length = 549
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +1
Query: 259 VPGPVGAPCHPMLYGKLHSNKLSYFVFNCFMISAKPFFWAGFKSVSRCGAPFNGNSIVS* 438
+PGP+ A + +L+ + + + F C + S + F GF P N S
Sbjct: 407 IPGPIIAAIYCLLFAYVGMAGVGFLQF-CNLNSFRTKFIVGFSVFMGLSVPQYFNEYTS- 464
Query: 439 GQTAQYGTIATHSEFFNTILSFNFNS 516
A YG + TH+ +FN +++ F+S
Sbjct: 465 --VAGYGPVHTHARWFNDMINVVFSS 488
>02_05_0704 -
31064996-31065214,31065306-31065466,31065583-31065660,
31066560-31066651,31066775-31066833,31066924-31067010,
31067118-31067214,31067311-31067495,31067593-31067665,
31067725-31067805,31067948-31068048,31068133-31068246,
31068391-31068488,31069789-31069915
Length = 523
Score = 34.7 bits (76), Expect = 0.081
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +1
Query: 259 VPGPVGAPCHPMLYGKLHSNKLSYFVFNCFMISAKPFFWAGFKSVSRCGAPFNGNSIVS* 438
+P P+ A + + + + S + + F C + S + F GF P N S
Sbjct: 381 IPPPIFAALYCIFFAYVGSAGVGFLQF-CNLNSFRTKFILGFSVFMGLSVPQYFNEYTS- 438
Query: 439 GQTAQYGTIATHSEFFNTILSFNFNS 516
A YG + THS +FN I++ F+S
Sbjct: 439 --VAGYGPVHTHSRWFNDIVNVIFSS 462
>08_02_0575 -
18876988-18877029,18877072-18877102,18878290-18878418,
18878512-18879154,18882042-18883990,18884964-18885040
Length = 956
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 280 PCHPMLYGKLHSNKLSYFVFNCFMISAKPFFWAGFKSVSRCGAPFNGNSI 429
P P+++ K + L YF F C +S+ F ++ R FNG+++
Sbjct: 564 PAEPIIFDKSGFHVLKYFKFKCSTVSSLRFDEGAMPNLQRLKMEFNGSTV 613
>03_06_0039 + 31235840-31236214,31237057-31237674
Length = 330
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 620 WASSFLPNEPRIKDRCQSEYYAKYGNSLLVD 528
WA S L N P+I + ++E A GNS L++
Sbjct: 141 WAMSLLLNHPKILKKAKAEIDASVGNSRLIN 171
>11_08_0029 - 27783907-27784310,27784418-27786616,27786751-27787333
Length = 1061
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -2
Query: 461 VPYWAVWPYETMLLPLNGAPQRLTDLNPAQKKGLAEIMKQLNT 333
+P A WP E +LLP+ +PA++ G+++++ +L +
Sbjct: 1007 LPRSATWPNEGLLLPIFELGLMCCSSSPAERMGISDVVVKLKS 1049
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 620 WASSFLPNEPRIKDRCQSEYYAKYGNSLLV 531
WA S L N P I + Q+E GNS L+
Sbjct: 329 WAMSLLLNHPEILKKAQAEIDMSVGNSRLI 358
>03_06_0037 + 31222963-31223886,31225172-31225786
Length = 512
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 620 WASSFLPNEPRIKDRCQSEYYAKYGNSLLV 531
WA S L N P + Q+E A GNS L+
Sbjct: 324 WAMSLLLNHPETLKKAQAEIDASVGNSRLI 353
>10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 333 RVQLLHDFG*AFLLGGVQVGQPLWGTVQ 416
+V +L+D A +GGV++GQ LW V+
Sbjct: 1047 KVSILNDGSIAVEVGGVEIGQGLWTKVK 1074
>07_01_1146 + 10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 333 RVQLLHDFG*AFLLGGVQVGQPLWGTVQ 416
RV +L+D +GGV++GQ LW VQ
Sbjct: 1049 RVSVLNDGSIVVEVGGVELGQGLWTKVQ 1076
>10_08_0810 +
20734490-20734606,20735182-20735433,20735521-20735664,
20735774-20736493,20736955-20737177,20737463-20737523,
20738294-20738615
Length = 612
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 662 CHYGCSNPHPHCQIWASSFLPNEPRI 585
C C PHPH ASS + N+ +I
Sbjct: 370 CVVNCIEPHPHTMTIASSGIDNDVKI 395
>07_03_0901 + 22433920-22434048,22434201-22434872
Length = 266
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 231 TSRSVPAAVATIGHHQEVHGRLRDAGANATGPNTLNK 121
TSR + A +GH + + +RD A ATG T++K
Sbjct: 9 TSRVLAAKTPFLGHPRPSNAPVRDIAAAATGRITMSK 45
>04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912
Length = 519
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 188 WWPIVA-TAAGTEREVTSAVNHHESFPGPLELRAIPCCTGSCT 313
W+P T E + T NH P P++ R I C + C+
Sbjct: 115 WFPCAPFTCMLCEGKATPGGNHSSPLPPPIDSRRISCASPLCS 157
>03_06_0038 +
31227349-31227621,31228120-31228212,31229439-31229575,
31229953-31231030,31231757-31232374
Length = 732
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 620 WASSFLPNEPRIKDRCQSEYYAKYGNSLLV 531
WA S L N P + Q+E A GNS L+
Sbjct: 543 WAMSLLLNHPDTLKKAQAEIDASVGNSRLI 572
>02_04_0489 +
23404757-23404812,23406170-23406296,23406418-23406487,
23406997-23407102,23407185-23407296,23407792-23407914,
23408017-23408176,23408300-23408376,23408474-23408526,
23408700-23408754,23409049-23409683,23410412-23410733,
23410838-23411146,23411468-23411470
Length = 735
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -2
Query: 662 CHYGCSNPHPHCQIWASSFLPNEPRIKDRCQSE 564
CH GC + P W+ + +P PR+ + +++
Sbjct: 616 CHAGCRHFVPEIGPWSEATIPENPRLPNSDEND 648
>01_06_1745 -
39609894-39610030,39610127-39610223,39613856-39613996,
39614094-39614272,39615067-39615111,39615802-39615858,
39615935-39616163,39616348-39616418,39619527-39619635
Length = 354
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 686 GTNIRKQGCHYGCSNPHP 633
GTN K+G H +NPHP
Sbjct: 310 GTNTSKRGSHLQVTNPHP 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,115,388
Number of Sequences: 37544
Number of extensions: 429165
Number of successful extensions: 1236
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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