Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_H05
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008868-1|AAH08868.1|  463|Homo sapiens NADH dehydrogenase (ubi...    33   1.2  
BC001456-1|AAH01456.1|  463|Homo sapiens NADH dehydrogenase (ubi...    33   1.2  
BC000170-1|AAH00170.1|  463|Homo sapiens NADH dehydrogenase (ubi...    33   1.2  
AL590714-8|CAH72148.1|  463|Homo sapiens NADH dehydrogenase (ubi...    33   1.2  
AK222618-1|BAD96338.1|  463|Homo sapiens NADH dehydrogenase (ubi...    33   1.2  
AF050640-1|AAC27453.1|  463|Homo sapiens NADH-ubiquinone oxidore...    33   1.2  
AF013160-1|AAC34362.1|  463|Homo sapiens NADH dehydrogenase-ubiq...    33   1.2  

>BC008868-1|AAH08868.1|  463|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
           reductas protein.
          Length = 463

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 424 PPGRSRPXXQKLTPPSREXMKTSMXXXIH 338
           PPG  +    K++PP R  MKTSM   IH
Sbjct: 352 PPGEIKVDDAKVSPPKRAEMKTSMESLIH 380


>BC001456-1|AAH01456.1|  463|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
           reductas protein.
          Length = 463

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 424 PPGRSRPXXQKLTPPSREXMKTSMXXXIH 338
           PPG  +    K++PP R  MKTSM   IH
Sbjct: 352 PPGEIKVDDAKVSPPKRAEMKTSMESLIH 380


>BC000170-1|AAH00170.1|  463|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
           reductas protein.
          Length = 463

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 424 PPGRSRPXXQKLTPPSREXMKTSMXXXIH 338
           PPG  +    K++PP R  MKTSM   IH
Sbjct: 352 PPGEIKVDDAKVSPPKRAEMKTSMESLIH 380


>AL590714-8|CAH72148.1|  463|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
           reductas protein.
          Length = 463

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 424 PPGRSRPXXQKLTPPSREXMKTSMXXXIH 338
           PPG  +    K++PP R  MKTSM   IH
Sbjct: 352 PPGEIKVDDAKVSPPKRAEMKTSMESLIH 380


>AK222618-1|BAD96338.1|  463|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
           reductas protein.
          Length = 463

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 424 PPGRSRPXXQKLTPPSREXMKTSMXXXIH 338
           PPG  +    K++PP R  MKTSM   IH
Sbjct: 352 PPGEIKVDDAKVSPPKRAEMKTSMESLIH 380


>AF050640-1|AAC27453.1|  463|Homo sapiens NADH-ubiquinone
           oxidoreductase NDUFS2 subunit protein.
          Length = 463

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 424 PPGRSRPXXQKLTPPSREXMKTSMXXXIH 338
           PPG  +    K++PP R  MKTSM   IH
Sbjct: 352 PPGEIKVDDAKVSPPKRAEMKTSMESLIH 380


>AF013160-1|AAC34362.1|  463|Homo sapiens NADH
           dehydrogenase-ubiquinone Fe-S protein 2 precursor
           protein.
          Length = 463

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 424 PPGRSRPXXQKLTPPSREXMKTSMXXXIH 338
           PPG  +    K++PP R  MKTSM   IH
Sbjct: 352 PPGEIKVDDAKVSPPKRAEMKTSMESLIH 380


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,412,709
Number of Sequences: 237096
Number of extensions: 858838
Number of successful extensions: 1405
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)