Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_H04
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical ... 31 1.2
U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 30 2.1
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 30 2.1
AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 30 2.1
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 4.8
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 29 4.8
U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical pr... 24 6.1
U67954-4|AAM54180.1| 345|Caenorhabditis elegans Wrapper/rega-1/... 28 6.4
U55374-4|AAB36866.2| 589|Caenorhabditis elegans Immunoglobulin-... 28 6.4
U55374-3|ABS19462.1| 591|Caenorhabditis elegans Immunoglobulin-... 28 6.4
AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobuli... 28 6.4
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 6.4
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 8.4
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 8.4
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 8.4
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 28 8.4
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 28 8.4
>AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical
protein F13C5.1 protein.
Length = 437
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Frame = +3
Query: 375 QQILPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIR-------QRNP 533
Q++ P T L+ +T RK ++ C + + THF I+ +
Sbjct: 297 QKVAPNRAATRTLKKTVRARKLTKR-RKRSSAVCSSGSLTHFESHHGIKLLTIGVLPLDD 355
Query: 534 NTAASPDTNAPDV--LSYRSRRLQNVSIFLPHGKLACFLVLLACWSPKSSN 680
N+ A+ +A ++ L+Y S + N+ IF+P L+ FLV + +S SS+
Sbjct: 356 NSYAANICSAANIPFLAYYSVEMFNIVIFIPKTFLSYFLVSFSTFSISSSS 406
>U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical
protein C24A8.1 protein.
Length = 582
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 422 TSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIAR 553
TS RR+SH + NRE ++S LH +L PP E R++ R
Sbjct: 334 TSRKRRHSHQPQGNREVVTSEESKKLH--SLKPPL-VEKRKMRR 374
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +3
Query: 387 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 548
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +3
Query: 387 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 548
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical
protein Y17G9B.1 protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 134 VLWQVQPETSTCVPELQCVTDKWFWLPLYVPFKV 33
+LWQ+ +TC P LQ ++W L L + FK+
Sbjct: 421 ILWQL---ITTCKPRLQVDKERWIQLLLNIKFKI 451
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/58 (27%), Positives = 21/58 (36%)
Frame = +3
Query: 384 LPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDT 557
LP TT+ T+ P + + +KPT T T K P T P T
Sbjct: 591 LPFTTEQTVTTEEPTTAEKSTATQKPTTTQESVSTEKTSTTKKASTTEEPTTTDEPTT 648
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 372 PQQILPATTQTTILRV-PPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 548
P + PA + T+ PP+ + P+L +PT Q S + + + +N AA+
Sbjct: 250 PAPVAPAPSIETLTSTSPPVTQQLAPSLSEPTFQVIQTEESKNMSMDSV---KNVVDAAA 306
Query: 549 PDTNAPDVLSYRSRRLQNV 605
AP LS +S RL +V
Sbjct: 307 LSAPAPAPLS-QSDRLNHV 324
>U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical
protein F41G3.10 protein.
Length = 198
Score = 24.2 bits (50), Expect(2) = 6.1
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 462 TANTCQARTSTHFTGKTCIRQRNPNTAASPDT 557
T C +T T TC+ NP T S T
Sbjct: 83 TCGYCTGTATTTRTSTTCVDLTNPTTGVSDCT 114
Score = 22.6 bits (46), Expect(2) = 6.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 312 SHVRLPVQTHKTFYHHANFLPQQILPATTQTTI 410
S + + V +TF L QQ+L TT+T++
Sbjct: 10 SLLEVVVALMETFSQSPQHLQQQLLSTTTRTSV 42
>U67954-4|AAM54180.1| 345|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform c
protein.
Length = 345
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 372 VRSLHGGKMSCESAQVAGRETSAVAAHPVRENRADRLDGXGGRPTGPP 229
V+ H GK +C + +AG + + + H + +R GRP GPP
Sbjct: 177 VKKHHAGKYNCLAENIAGSDRATIDIHVAEPLQGER----EGRP-GPP 219
>U55374-4|AAB36866.2| 589|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
3, isoform a protein.
Length = 589
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 214 RDLVVWRTRRPASXTVEAICP 276
R +V WR R+P V+A CP
Sbjct: 293 RPIVYWRMRKPNGDVVDAACP 313
>U55374-3|ABS19462.1| 591|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
3, isoform b protein.
Length = 591
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 214 RDLVVWRTRRPASXTVEAICP 276
R +V WR R+P V+A CP
Sbjct: 293 RPIVYWRMRKPNGDVVDAACP 313
>AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobulin
domain-containingprotein WRK-1C protein.
Length = 344
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 372 VRSLHGGKMSCESAQVAGRETSAVAAHPVRENRADRLDGXGGRPTGPP 229
V+ H GK +C + +AG + + + H + +R GRP GPP
Sbjct: 176 VKKHHAGKYNCLAENIAGSDRATIDIHVAEPLQGER----EGRP-GPP 218
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 119 GPATAQCPTRRRTL-AQVQPERGAPISAVRAGG 214
GP A CP RTL A PE G +A AGG
Sbjct: 292 GPDAAYCPCPPRTLGAGAYPEGGDAAAAAPAGG 324
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +2
Query: 410 FTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVT 589
+TGS + R S E A S + L K + + + R +T RL+ +V
Sbjct: 3728 YTGSLNEISRSSELEHAAIHDHSQVYHDGLSYKIDNKQKKSKDRTELEEPKTSRLVARVL 3787
Query: 590 TTSECVNFSSPRK 628
E + SP+K
Sbjct: 3788 PQQEASDSGSPKK 3800
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +2
Query: 410 FTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVT 589
+TGS + R S E A S + L K + + + R +T RL+ +V
Sbjct: 3717 YTGSLNEISRSSELEHAAIHDHSQVYHDGLSYKIDNKQKKSKDRTELEEPKTSRLVARVL 3776
Query: 590 TTSECVNFSSPRK 628
E + SP+K
Sbjct: 3777 PQQEASDSGSPKK 3789
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +2
Query: 410 FTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVT 589
+TGS + R S E A S + L K + + + R +T RL+ +V
Sbjct: 3717 YTGSLNEISRSSELEHAAIHDHSQVYHDGLSYKIDNKQKKSKDRTELEEPKTSRLVARVL 3776
Query: 590 TTSECVNFSSPRK 628
E + SP+K
Sbjct: 3777 PQQEASDSGSPKK 3789
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +2
Query: 410 FTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVT 589
+TGS + R S E A S + L K + + + R +T RL+ +V
Sbjct: 3728 YTGSLNEISRSSELEHAAIHDHSQVYHDGLSYKIDNKQKKSKDRTELEEPKTSRLVARVL 3787
Query: 590 TTSECVNFSSPRK 628
E + SP+K
Sbjct: 3788 PQQEASDSGSPKK 3800
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +2
Query: 410 FTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVT 589
+TGS + R S E A S + L K + + + R +T RL+ +V
Sbjct: 3717 YTGSLNEISRSSELEHAAIHDHSQVYHDGLSYKIDNKQKKSKDRTELEEPKTSRLVARVL 3776
Query: 590 TTSECVNFSSPRK 628
E + SP+K
Sbjct: 3777 PQQEASDSGSPKK 3789
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +2
Query: 410 FTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVT 589
+TGS + R S E A S + L K + + + R +T RL+ +V
Sbjct: 3717 YTGSLNEISRSSELEHAAIHDHSQVYHDGLSYKIDNKQKKSKDRTELEEPKTSRLVARVL 3776
Query: 590 TTSECVNFSSPRK 628
E + SP+K
Sbjct: 3777 PQQEASDSGSPKK 3789
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -3
Query: 375 AVRSLHGGKMSCESAQVAGRETSAVA-AHPVRENR--ADRLDGXGGRPTGPPNDEITPP 208
AV GG +CE+ + G A A +P R + A L G G+P P + ITPP
Sbjct: 90 AVHGGGGGGGNCEACCLPGPAGPAGAPGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPP 148
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Frame = -3
Query: 357 GGKMSCESAQVAGRE-TSAVAAHPVRENR--ADRLDGXGGRPTGPPNDEIT-PPARTADI 190
GG SC + G S P R R A L G GRP P IT PP R
Sbjct: 101 GGGGSCSGCCLPGPAGPSGAPGKPGRPGRPGAGGLPGNPGRPPAQPCHPITPPPCRPCPQ 160
Query: 189 GAP 181
G P
Sbjct: 161 GPP 163
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 338 SQDILPPCKLLTATNLTSHHANYNFTG--STSLTRRYSHTEEANREHLSSTHKHALHRKN 511
S ++ + T T +S NYN ++S + + ++++H S K + +KN
Sbjct: 13 STELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKN 72
Query: 512 LHPPAEPE 535
P +P+
Sbjct: 73 RSPSPQPQ 80
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 338 SQDILPPCKLLTATNLTSHHANYNFTG--STSLTRRYSHTEEANREHLSSTHKHALHRKN 511
S ++ + T T +S NYN ++S + + ++++H S K + +KN
Sbjct: 13 STELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKN 72
Query: 512 LHPPAEPE 535
P +P+
Sbjct: 73 RSPSPQPQ 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,423,276
Number of Sequences: 27780
Number of extensions: 372021
Number of successful extensions: 1341
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -