Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_G21
         (802 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25286-1|AAA58429.1| 1388|Homo sapiens alpha-1 type XV collagen ...    31   4.8  
L25280-1|AAC78500.1| 1388|Homo sapiens type XV collagen protein.       31   4.8  
D21230-1|BAA04762.1|  569|Homo sapiens alpha 1(XV) collagen chai...    31   4.8  
AL354923-1|CAI12548.2| 1388|Homo sapiens collagen type XV alpha ...    31   4.8  
AL136084-3|CAI17044.2| 1388|Homo sapiens collagen type XV alpha ...    31   4.8  

>L25286-1|AAA58429.1| 1388|Homo sapiens alpha-1 type XV collagen
           protein.
          Length = 1388

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 119 PKDFRAHPLNDSPALLHPTSDLRPGSEPVQSRGVPAVN-TTTRHAAPPRG 265
           PK+ +  P+N  P    P  D+    EPV    +   N +  +H++P +G
Sbjct: 269 PKEAKVEPINTPPTPSSPFEDMELSGEPVPEGTLETTNMSIIQHSSPKQG 318


>L25280-1|AAC78500.1| 1388|Homo sapiens type XV collagen protein.
          Length = 1388

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 119 PKDFRAHPLNDSPALLHPTSDLRPGSEPVQSRGVPAVN-TTTRHAAPPRG 265
           PK+ +  P+N  P    P  D+    EPV    +   N +  +H++P +G
Sbjct: 269 PKEAKVEPINTPPTPSSPFEDMELSGEPVPEGTLETTNMSIIQHSSPKQG 318


>D21230-1|BAA04762.1|  569|Homo sapiens alpha 1(XV) collagen chain
           protein.
          Length = 569

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 119 PKDFRAHPLNDSPALLHPTSDLRPGSEPVQSRGVPAVN-TTTRHAAPPRG 265
           PK+ +  P+N  P    P  D+    EPV    +   N +  +H++P +G
Sbjct: 269 PKEAKVEPINTPPTPSSPFEDMELSGEPVPEGTLETTNMSIIQHSSPKQG 318


>AL354923-1|CAI12548.2| 1388|Homo sapiens collagen type XV alpha 1
           protein.
          Length = 1388

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 119 PKDFRAHPLNDSPALLHPTSDLRPGSEPVQSRGVPAVN-TTTRHAAPPRG 265
           PK+ +  P+N  P    P  D+    EPV    +   N +  +H++P +G
Sbjct: 269 PKEAKVEPINTPPTPSSPFEDMELSGEPVPEGTLETTNMSIIQHSSPKQG 318


>AL136084-3|CAI17044.2| 1388|Homo sapiens collagen type XV alpha 1
           protein.
          Length = 1388

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 119 PKDFRAHPLNDSPALLHPTSDLRPGSEPVQSRGVPAVN-TTTRHAAPPRG 265
           PK+ +  P+N  P    P  D+    EPV    +   N +  +H++P +G
Sbjct: 269 PKEAKVEPINTPPTPSSPFEDMELSGEPVPEGTLETTNMSIIQHSSPKQG 318


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,606,831
Number of Sequences: 237096
Number of extensions: 2227442
Number of successful extensions: 9445
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9433
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)