Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_F18
(785 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 85 8e-17
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 77 2e-14
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 77 2e-14
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 75 1e-13
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 75 1e-13
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 66 5e-11
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 63 4e-10
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 63 4e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 60 4e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 51 2e-06
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 51 2e-06
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 51 2e-06
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 51 2e-06
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 31 1.8
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 31 1.8
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 31 1.8
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 31 1.8
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 31 1.8
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 31 1.8
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 31 1.8
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 31 1.8
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 31 1.8
AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p pro... 29 7.2
AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-P... 29 7.2
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 29 9.5
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 85.4 bits (202), Expect = 8e-17
Identities = 45/127 (35%), Positives = 68/127 (53%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 509
++ RSK+SL NK+T+YK + P Y ++ A H+K Q IQ++ R+ G WF
Sbjct: 779 LLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWF 838
Query: 508 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPK 329
VRN LH DL L ++ + S R+ D+ RH N L A P R+ +RR+P+
Sbjct: 839 VRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQPR 894
Query: 328 HVISDPP 308
+I+ P
Sbjct: 895 DLITRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 77.4 bits (182), Expect = 2e-14
Identities = 34/97 (35%), Positives = 58/97 (59%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 509
+I RS +SL K LY + ++P+ TY S ++ +A+R ++ Q QSR RI GAPW+
Sbjct: 770 LINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
Query: 508 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 398
+RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 830 LRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 77.4 bits (182), Expect = 2e-14
Identities = 34/97 (35%), Positives = 58/97 (59%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 509
+I RS +SL K LY + ++P+ TY S ++ +A+R ++ Q QSR RI GAPW+
Sbjct: 770 LINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
Query: 508 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 398
+RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 830 LRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 74.9 bits (176), Expect = 1e-13
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 509
+I R+K+SL KV +YK+ + P + Y V+ AA+ HL +I+Q++ R GAPW+
Sbjct: 784 LIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWY 843
Query: 508 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RMESSRRRP 332
+R D+ DL + + LQ+ + ++ ++ H N L G AD R RR
Sbjct: 844 MRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLK 903
Query: 331 KHVISDPPD 305
+H D P+
Sbjct: 904 RHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 74.9 bits (176), Expect = 1e-13
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 509
+I R+K+SL KV +YK+ + P + Y V+ AA+ HL +I+Q++ R GAPW+
Sbjct: 586 LIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWY 645
Query: 508 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RMESSRRRP 332
+R D+ DL + + LQ+ + ++ ++ H N L G AD R RR
Sbjct: 646 MRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTRVKRRLK 705
Query: 331 KHVISDPPD 305
+H D P+
Sbjct: 706 RHHPHDLPN 714
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 66.1 bits (154), Expect = 5e-11
Identities = 29/97 (29%), Positives = 54/97 (55%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 509
++ R+S M+LR K +Y C+ P+ Y ++ AA+ + Q++Q+R R P++
Sbjct: 785 LLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYY 844
Query: 508 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 398
VR LH DL+L ++ + + + R+ D+ RH + L
Sbjct: 845 VRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 63.3 bits (147), Expect = 4e-10
Identities = 24/81 (29%), Positives = 48/81 (59%)
Frame = -2
Query: 691 PMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPW 512
P+I R+SK+S+ NK+ ++KT P++ Y S V+ A+ H+K QI Q++ ++ + P+
Sbjct: 803 PLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPY 862
Query: 511 FVRNVDLHDDLDLESISKYLQ 449
+ LH ++ + + +Q
Sbjct: 863 YTNTKYLHIKAGVQKVQQKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 63.3 bits (147), Expect = 4e-10
Identities = 24/81 (29%), Positives = 48/81 (59%)
Frame = -2
Query: 691 PMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPW 512
P+I R+SK+S+ NK+ ++KT P++ Y S V+ A+ H+K QI Q++ ++ + P+
Sbjct: 751 PLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPY 810
Query: 511 FVRNVDLHDDLDLESISKYLQ 449
+ LH ++ + + +Q
Sbjct: 811 YTNTKYLHIKAGVQKVQQKIQ 831
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 59.7 bits (138), Expect = 4e-09
Identities = 25/71 (35%), Positives = 46/71 (64%)
Frame = -2
Query: 673 SKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVD 494
S +SL +KV LY + ++P+ TY S ++ +A+ ++ Q QS+ R GAPW+VR+ +
Sbjct: 777 SPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSEN 836
Query: 493 LHDDLDLESIS 461
+ DL++ S++
Sbjct: 837 IQRDLNIPSVT 847
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.2 bits (117), Expect = 2e-06
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 512
+I + S + K+ L+K + P+ YA ++ + K Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRR 338
+ R D+ +++S + AS R+ + HENPLI + Y P +R+E S+
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 958
Query: 337 R 335
R
Sbjct: 959 R 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.2 bits (117), Expect = 2e-06
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 512
+I + S + K+ L+K + P+ YA ++ + K Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRR 338
+ R D+ +++S + AS R+ + HENPLI + Y P +R+E S+
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 958
Query: 337 R 335
R
Sbjct: 959 R 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.2 bits (117), Expect = 2e-06
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 512
+I + S + K+ L+K + P+ YA ++ + K Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRR 338
+ R D+ +++S + AS R+ + HENPLI + Y P +R+E S+
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 958
Query: 337 R 335
R
Sbjct: 959 R 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 50.8 bits (116), Expect = 2e-06
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = -2
Query: 688 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 512
+I + S + K+ L+K + P+ YA ++ + K Q +++++ R + A
Sbjct: 395 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 454
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRR 338
+ R D+ +++S + AS R+ + HENPLI + Y P +R+E S+
Sbjct: 455 YTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 511
Query: 337 R 335
R
Sbjct: 512 R 512
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 323 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 171
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
>AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-PA
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 323 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 171
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +2
Query: 503 PDEP--RGSDGYPAKTGLNNLKG 565
P EP +G GYP + G+N LKG
Sbjct: 1096 PGEPGAKGLGGYPGRNGINGLKG 1118
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,626,191
Number of Sequences: 53049
Number of extensions: 643065
Number of successful extensions: 1556
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -