Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_F12
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 233 1e-61
AF003140-5|AAD47120.1| 814|Caenorhabditis elegans Hypothetical ... 28 8.6
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 28 8.6
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 591 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 412
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 411 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 232
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 231 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 106
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = -1
Query: 739 TIEDKVKWAREHLGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 563
TIE KV WAREHL + + VD+VFAQDEMID I TSRWHTKKLPRKTH+G
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 591 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 412
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 411 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 232
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 231 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 106
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = -1
Query: 739 TIEDKVKWAREHLGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 563
TIE KV WAREHL + + VD+VFAQDEMID I TSRWHTKKLPRKTH+G
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 591 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 412
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 411 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 232
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 231 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 106
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = -1
Query: 739 TIEDKVKWAREHLGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 563
TIE KV WAREHL + + VD+VFAQDEMID I TSRWHTKKLPRKTH+G
Sbjct: 91 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 591 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 412
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 411 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 232
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 231 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 106
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -1
Query: 676 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 563
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 591 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 412
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 411 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 232
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 231 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 106
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = -1
Query: 739 TIEDKVKWAREHLGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 563
TIE KV WAREHL + + VD+VFAQDEMID I TSRWHTKKLPRKTH+G
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 591 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 412
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 411 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 232
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 231 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 106
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = -1
Query: 739 TIEDKVKWAREHLGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 563
TIE KV WAREHL + + VD+VFAQDEMID I TSRWHTKKLPRKTH+G
Sbjct: 91 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 591 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 412
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 411 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 232
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 231 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 106
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -1
Query: 676 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 563
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 591 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 412
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 411 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 232
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 231 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 106
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = -1
Query: 739 TIEDKVKWAREHLGEPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 563
TIE KV WAREHL + + VD+VFAQDEMID I TSRWHTKKLPRKTH+G
Sbjct: 189 TIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>AF003140-5|AAD47120.1| 814|Caenorhabditis elegans Hypothetical
protein C44E4.1b protein.
Length = 814
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 760 WNPT*RCTIEDKVKWAREHLGEPIPVDSVFAQD 662
+N + T ED+++W REHL E I F D
Sbjct: 747 FNKVIKITGEDRLEWLREHLVETINKTRGFVDD 779
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 760 WNPT*RCTIEDKVKWAREHLGEPIPVDSVFAQD 662
+N + T ED+++W REHL E I F D
Sbjct: 2645 FNKVIKITGEDRLEWLREHLVETINKTRGFVDD 2677
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 760 WNPT*RCTIEDKVKWAREHLGEPIPVDSVFAQD 662
+N + T ED+++W REHL E I F D
Sbjct: 2643 FNKVIKITGEDRLEWLREHLVETINKTRGFVDD 2675
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,528,491
Number of Sequences: 27780
Number of extensions: 411963
Number of successful extensions: 1071
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -