SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_F11
         (789 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009758-1|AAP88760.1|  577|Homo sapiens protein tyrosine phosph...    31   4.7  
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph...    31   4.7  
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.       31   4.7  
BC004881-1|AAH04881.2|  619|Homo sapiens PTPN23 protein protein.       31   4.7  
AL110210-1|CAB53676.1|  990|Homo sapiens hypothetical protein pr...    31   4.7  
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph...    31   4.7  
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph...    31   4.7  
BC007439-1|AAH07439.1|  582|Homo sapiens DCP1 decapping enzyme h...    31   6.3  
AY146651-1|AAN62763.1|  582|Homo sapiens decapping enzyme hDcp1a...    31   6.3  
AK001969-1|BAA92008.1|  582|Homo sapiens protein ( Homo sapiens ...    31   6.3  
AJ275986-1|CAB77023.1|  582|Homo sapiens transcription factor pr...    31   6.3  
AB075507-1|BAE45754.1|  582|Homo sapiens putative protein produc...    31   6.3  

>BT009758-1|AAP88760.1|  577|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 23 protein.
          Length = 577

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -1

Query: 675 PIIKSPDSIHQPPQT*HPFSS-IPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 499
           P    P+S   P  +  P SS +P  P  KE     +PP+  EAPS+    SSL +   +
Sbjct: 471 PPASLPESTPIPSSSPPPLSSPLPEAPQPKE-----EPPVP-EAPSSGPPSSSLELLASL 524

Query: 498 SPPYFQVNDESQASRLISRHS 436
           +P  F ++   +  + +S+H+
Sbjct: 525 TPEAFSLDSSLRGKQRMSKHN 545


>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
            phosphatase, non-receptor type 23 protein.
          Length = 1636

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -1

Query: 675  PIIKSPDSIHQPPQT*HPFSS-IPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 499
            P    P+S   P  +  P SS +P  P  KE     +PP+  EAPS+    SSL +   +
Sbjct: 1530 PPASLPESTPIPSSSPPPLSSPLPEAPQPKE-----EPPVP-EAPSSGPPSSSLELLASL 1583

Query: 498  SPPYFQVNDESQASRLISRHS 436
            +P  F ++   +  + +S+H+
Sbjct: 1584 TPEAFSLDSSLRGKQRMSKHN 1604


>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
          Length = 1320

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -1

Query: 675  PIIKSPDSIHQPPQT*HPFSS-IPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 499
            P    P+S   P  +  P SS +P  P  KE     +PP+  EAPS+    SSL +   +
Sbjct: 1214 PPASLPESTPIPSSSPPPLSSPLPEAPQPKE-----EPPVP-EAPSSGPPSSSLELLASL 1267

Query: 498  SPPYFQVNDESQASRLISRHS 436
            +P  F ++   +  + +S+H+
Sbjct: 1268 TPEAFSLDSSLRGKQRMSKHN 1288


>BC004881-1|AAH04881.2|  619|Homo sapiens PTPN23 protein protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -1

Query: 675 PIIKSPDSIHQPPQT*HPFSS-IPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 499
           P    P+S   P  +  P SS +P  P  KE     +PP+  EAPS+    SSL +   +
Sbjct: 513 PPASLPESTPIPSSSPPPLSSPLPEAPQPKE-----EPPVP-EAPSSGPPSSSLELLASL 566

Query: 498 SPPYFQVNDESQASRLISRHS 436
           +P  F ++   +  + +S+H+
Sbjct: 567 TPEAFSLDSSLRGKQRMSKHN 587


>AL110210-1|CAB53676.1|  990|Homo sapiens hypothetical protein
            protein.
          Length = 990

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -1

Query: 675  PIIKSPDSIHQPPQT*HPFSS-IPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 499
            P    P+S   P  +  P SS +P  P  KE     +PP+  EAPS+    SSL +   +
Sbjct: 884  PPASLPESTPIPSSSPPPLSSPLPEAPQPKE-----EPPVP-EAPSSGPPSSSLELLASL 937

Query: 498  SPPYFQVNDESQASRLISRHS 436
            +P  F ++   +  + +S+H+
Sbjct: 938  TPEAFSLDSSLRGKQRMSKHN 958


>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
            TD14 protein.
          Length = 1636

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -1

Query: 675  PIIKSPDSIHQPPQT*HPFSS-IPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 499
            P    P+S   P  +  P SS +P  P  KE     +PP+  EAPS+    SSL +   +
Sbjct: 1530 PPASLPESTPIPSSSPPPLSSPLPEAPQPKE-----EPPVP-EAPSSGPPSSSLELLASL 1583

Query: 498  SPPYFQVNDESQASRLISRHS 436
            +P  F ++   +  + +S+H+
Sbjct: 1584 TPEAFSLDSSLRGKQRMSKHN 1604


>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
            HD-PTP protein.
          Length = 1636

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -1

Query: 675  PIIKSPDSIHQPPQT*HPFSS-IPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 499
            P    P+S   P  +  P SS +P  P  KE     +PP+  EAPS+    SSL +   +
Sbjct: 1530 PPASLPESTPIPSSSPPPLSSPLPEAPQPKE-----EPPVP-EAPSSGPPSSSLELLASL 1583

Query: 498  SPPYFQVNDESQASRLISRHS 436
            +P  F ++   +  + +S+H+
Sbjct: 1584 TPEAFSLDSSLRGKQRMSKHN 1604


>BC007439-1|AAH07439.1|  582|Homo sapiens DCP1 decapping enzyme
           homolog A (S. cerevisiae) protein.
          Length = 582

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -1

Query: 675 PIIKSPDSIHQPPQT*HPFSSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
           P++ +P SI Q  +   P  +IPL+P        L P L +EAP+A + PS
Sbjct: 291 PVLITPASITQSNEKHAPTYTIPLSPV-------LSPTLPAEAPTAQVPPS 334


>AY146651-1|AAN62763.1|  582|Homo sapiens decapping enzyme hDcp1a
           protein.
          Length = 582

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -1

Query: 675 PIIKSPDSIHQPPQT*HPFSSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
           P++ +P SI Q  +   P  +IPL+P        L P L +EAP+A + PS
Sbjct: 291 PVLITPASITQSNEKHAPTYTIPLSPV-------LSPTLPAEAPTAQVPPS 334


>AK001969-1|BAA92008.1|  582|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11107 fis, clone PLACE1005803. ).
          Length = 582

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -1

Query: 675 PIIKSPDSIHQPPQT*HPFSSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
           P++ +P SI Q  +   P  +IPL+P        L P L +EAP+A + PS
Sbjct: 291 PVLITPASITQSNEKHAPTYTIPLSPV-------LSPTLPAEAPTAQVPPS 334


>AJ275986-1|CAB77023.1|  582|Homo sapiens transcription factor
           protein.
          Length = 582

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -1

Query: 675 PIIKSPDSIHQPPQT*HPFSSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
           P++ +P SI Q  +   P  +IPL+P        L P L +EAP+A + PS
Sbjct: 291 PVLITPASITQSNEKHAPTYTIPLSPV-------LSPTLPAEAPTAQVPPS 334


>AB075507-1|BAE45754.1|  582|Homo sapiens putative protein product
           of Nbla00360 protein.
          Length = 582

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -1

Query: 675 PIIKSPDSIHQPPQT*HPFSSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
           P++ +P SI Q  +   P  +IPL+P        L P L +EAP+A + PS
Sbjct: 291 PVLITPASITQSNEKHAPTYTIPLSPV-------LSPTLPAEAPTAQVPPS 334


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,454,445
Number of Sequences: 237096
Number of extensions: 2371945
Number of successful extensions: 5613
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5613
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -