Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_F09
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P...   120   2e-27
AY119661-1|AAM50315.1|  727|Drosophila melanogaster SD05527p pro...    87   3e-17
AE014296-3658|AAF51814.1|  727|Drosophila melanogaster CG9054-PA...    87   3e-17
U34773-1|AAC47309.1|  725|Drosophila melanogaster DEAD-box prote...    86   5e-17
D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine rece...    48   2e-05
D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine rece...    48   2e-05
AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD...    48   2e-05
AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC...    48   2e-05
AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA...    43   4e-04
BT010318-1|AAQ23636.1|  342|Drosophila melanogaster AT20211p pro...    38   0.012
AE014296-2601|AAF49563.2|  342|Drosophila melanogaster CG10516-P...    38   0.012
BT011464-1|AAR99122.1|  400|Drosophila melanogaster RE27154p pro...    32   1.0  
AY973546-1|AAX84047.1|  962|Drosophila melanogaster midlife cris...    32   1.0  
AY973545-1|AAX84046.1|  962|Drosophila melanogaster midlife cris...    32   1.0  
AY973544-1|AAX84045.1|  400|Drosophila melanogaster midlife cris...    32   1.0  
AE013599-1094|AAM68758.1|  598|Drosophila melanogaster CG11763-P...    32   1.0  
AE013599-1093|AAF58795.2|  960|Drosophila melanogaster CG11763-P...    32   1.0  
AE013599-1092|ABC66064.1|  962|Drosophila melanogaster CG11763-P...    32   1.0  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    31   2.4  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    31   2.4  
BT025190-1|ABF17881.1|  166|Drosophila melanogaster IP05104p pro...    29   9.6  
BT022942-1|AAY55358.1|  166|Drosophila melanogaster IP08406p pro...    29   9.6  

>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
           protein.
          Length = 1271

 Score =  120 bits (289), Expect = 2e-27
 Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
 Frame = -3

Query: 439 GIRIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPC 260
           G R+G+S   SSL LGE+E S+G+  TGR     E+ +YGK     DV+G YLDLESEPC
Sbjct: 373 GFRVGFSMPKSSLLLGEAEHSFGYCETGRKATQSEFTDYGKPYQLDDVIGCYLDLESEPC 432

Query: 259 VVSYTLNGAPLGTAFEFPRSALGDR-TLYPHVLTKNMCYKVNFGYERYNMLSKTKIVRKR 83
            ++YTLNG  LG AFEF +S LG+   L+PH++TK   Y VNF      +++  +  RKR
Sbjct: 433 TINYTLNGEDLGVAFEFEKSILGEEGALFPHIVTKGYEYLVNFSDTEQLLVNAERPTRKR 492



 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 20/49 (40%), Positives = 31/49 (63%)
 Frame = -1

Query: 669 SLTDNKVTLSWYDSDLNQYLELPELNSVVPLSEGAFSHAWAGARATHGL 523
           ++ +NKV LSW DSDL+  ++     S  PL+   +S  W+GARA +G+
Sbjct: 294 TIEENKVGLSWLDSDLHLRIDPTTFASAKPLTSEIYSLIWSGARANYGV 342


>AY119661-1|AAM50315.1|  727|Drosophila melanogaster SD05527p
           protein.
          Length = 727

 Score = 87.0 bits (206), Expect = 3e-17
 Identities = 42/101 (41%), Positives = 62/101 (61%)
 Frame = -3

Query: 433 RIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 254
           R+GWST  ++L LG   + +GF  TG+  NN ++ +YG++  + DV+G  LDL+++   V
Sbjct: 145 RVGWSTQQANLDLGTCRMGFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLKNQE--V 202

Query: 253 SYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 131
           S+T NG  LG AF  P + L   T YP V+ KN   + NFG
Sbjct: 203 SFTKNGQNLGVAFRLPDN-LAKETFYPAVVLKNAEMQFNFG 242


>AE014296-3658|AAF51814.1|  727|Drosophila melanogaster CG9054-PA
           protein.
          Length = 727

 Score = 87.0 bits (206), Expect = 3e-17
 Identities = 42/101 (41%), Positives = 62/101 (61%)
 Frame = -3

Query: 433 RIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 254
           R+GWST  ++L LG   + +GF  TG+  NN ++ +YG++  + DV+G  LDL+++   V
Sbjct: 145 RVGWSTQQANLDLGTCRMGFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLKNQE--V 202

Query: 253 SYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 131
           S+T NG  LG AF  P + L   T YP V+ KN   + NFG
Sbjct: 203 SFTKNGQNLGVAFRLPDN-LAKETFYPAVVLKNAEMQFNFG 242


>U34773-1|AAC47309.1|  725|Drosophila melanogaster DEAD-box protein
           protein.
          Length = 725

 Score = 86.2 bits (204), Expect = 5e-17
 Identities = 42/101 (41%), Positives = 62/101 (61%)
 Frame = -3

Query: 433 RIGWSTDDSSLHLGESELSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 254
           R+GWST  ++L LG   + +GF  TG+  NN ++ +YG++  + DV+G  LDL+++   V
Sbjct: 145 RVGWSTQQANLDLGTCRMGFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLKNQE--V 202

Query: 253 SYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 131
           S+T NG  LG AF  P + L   T YP V+ KN   + NFG
Sbjct: 203 SFTKNGQNLGVAFRSPDN-LAKETFYPAVVLKNAEMQFNFG 242


>D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5112

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = -3

Query: 460  EKDALTSG-IRIGWSTDDS--SLHLGESELSWGFESTGRI-VNNGEYKEYGKSLNEKDVV 293
            E + LTSG +R+GW+  D      LG  + SW F+      V  G  + +GK     D+V
Sbjct: 1096 EFEVLTSGPMRVGWARADCYPGAMLGSEDTSWAFDGHNEEKVYGGVSESFGKQCGPGDIV 1155

Query: 292  GAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNM 152
            G +LDL      +S++LNG       E    ALG  T +  V  + +
Sbjct: 1156 GVFLDLADH--TISFSLNG-------ELLMDALGGETTFADVTAEGV 1193


>D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5126

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = -3

Query: 460  EKDALTSG-IRIGWSTDDS--SLHLGESELSWGFESTGRI-VNNGEYKEYGKSLNEKDVV 293
            E + LTSG +R+GW+  D      LG  + SW F+      V  G  + +GK     D+V
Sbjct: 1096 EFEVLTSGPMRVGWARADCYPGAMLGSEDTSWAFDGHNEEKVYGGVSESFGKQCGPGDIV 1155

Query: 292  GAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNM 152
            G +LDL      +S++LNG       E    ALG  T +  V  + +
Sbjct: 1156 GVFLDLADH--TISFSLNG-------ELLMDALGGETTFADVTAEGV 1193


>AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD,
            isoform D protein.
          Length = 5113

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = -3

Query: 460  EKDALTSG-IRIGWSTDDS--SLHLGESELSWGFESTGRI-VNNGEYKEYGKSLNEKDVV 293
            E + LTSG +R+GW+  D      LG  + SW F+      V  G  + +GK     D+V
Sbjct: 1097 EFEVLTSGPMRVGWARADCYPGAMLGSEDTSWAFDGHNEEKVYGGVSESFGKQCGPGDIV 1156

Query: 292  GAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNM 152
            G +LDL      +S++LNG       E    ALG  T +  V  + +
Sbjct: 1157 GVFLDLADH--TISFSLNG-------ELLMDALGGETTFADVTAEGV 1194


>AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC,
            isoform C protein.
          Length = 5127

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = -3

Query: 460  EKDALTSG-IRIGWSTDDS--SLHLGESELSWGFESTGRI-VNNGEYKEYGKSLNEKDVV 293
            E + LTSG +R+GW+  D      LG  + SW F+      V  G  + +GK     D+V
Sbjct: 1097 EFEVLTSGPMRVGWARADCYPGAMLGSEDTSWAFDGHNEEKVYGGVSESFGKQCGPGDIV 1156

Query: 292  GAYLDLESEPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNM 152
            G +LDL      +S++LNG       E    ALG  T +  V  + +
Sbjct: 1157 GVFLDLADH--TISFSLNG-------ELLMDALGGETTFADVTAEGV 1194


>AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA
           protein.
          Length = 1332

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
 Frame = -3

Query: 445 TSGI-RIGWSTDDSSLH----LGESELSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYL 281
           T G+ +IGW+++    +    +G+++ S+G++ + + + +   K+YG      DV+G  +
Sbjct: 142 TKGVMQIGWASNSCQFNENSGVGDTKSSYGYDGSKQQIWHISTKKYGDKWQIGDVIGVTI 201

Query: 280 DLESEPCVVSYTLNGAPLGTAF 215
           D++ E  V+ Y  NG  +G AF
Sbjct: 202 DVDKE--VIEYYRNGRSMGVAF 221


>BT010318-1|AAQ23636.1|  342|Drosophila melanogaster AT20211p
           protein.
          Length = 342

 Score = 38.3 bits (85), Expect = 0.012
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = -3

Query: 397 LGESELSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGTA 218
           LG +  SWGF  +GRI + GE   YG+  ++  ++G  LD       + + LN   LG A
Sbjct: 130 LGTNAQSWGFSYSGRIQHCGELLPYGQKFSQGCLIGVCLDRTRGH--LEFYLNRRSLGVA 187

Query: 217 F 215
           +
Sbjct: 188 Y 188


>AE014296-2601|AAF49563.2|  342|Drosophila melanogaster CG10516-PA
           protein.
          Length = 342

 Score = 38.3 bits (85), Expect = 0.012
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = -3

Query: 397 LGESELSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGTA 218
           LG +  SWGF  +GRI + GE   YG+  ++  ++G  LD       + + LN   LG A
Sbjct: 130 LGTNAQSWGFSYSGRIQHCGELLPYGQKFSQGCLIGVCLDRTRGH--LEFYLNRRSLGVA 187

Query: 217 F 215
           +
Sbjct: 188 Y 188


>BT011464-1|AAR99122.1|  400|Drosophila melanogaster RE27154p
           protein.
          Length = 400

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
 Frame = -3

Query: 394 GESELSWGF--ESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 221
           G  + S+G+  +      ++G  + YG +    DV+G  ++  +  C   YT NG  LG 
Sbjct: 17  GWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCF--YTKNGVDLGI 74

Query: 220 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY---NMLSKTKIVRKRIEVPVEQV 59
           AF + P        LYP V   T       NFG E +    ++   K +R  +   +++ 
Sbjct: 75  AFRDLPTK------LYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRY 128

Query: 58  LEEKRVIEEEVNRL 17
                  E  +NRL
Sbjct: 129 PHLLETPENLMNRL 142


>AY973546-1|AAX84047.1|  962|Drosophila melanogaster midlife crisis
           protein.
          Length = 962

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
 Frame = -3

Query: 394 GESELSWGF--ESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 221
           G  + S+G+  +      ++G  + YG +    DV+G  ++  +  C   YT NG  LG 
Sbjct: 499 GWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCF--YTKNGVDLGI 556

Query: 220 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY---NMLSKTKIVRKRIEVPVEQV 59
           AF + P        LYP V   T       NFG E +    ++   K +R  +   +++ 
Sbjct: 557 AFRDLPTK------LYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRY 610

Query: 58  LEEKRVIEEEVNRL 17
                  E  +NRL
Sbjct: 611 PHLLETPENLMNRL 624


>AY973545-1|AAX84046.1|  962|Drosophila melanogaster midlife crisis
           protein.
          Length = 962

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
 Frame = -3

Query: 394 GESELSWGF--ESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 221
           G  + S+G+  +      ++G  + YG +    DV+G  ++  +  C   YT NG  LG 
Sbjct: 499 GWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCF--YTKNGVDLGI 556

Query: 220 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY---NMLSKTKIVRKRIEVPVEQV 59
           AF + P        LYP V   T       NFG E +    ++   K +R  +   +++ 
Sbjct: 557 AFRDLPTK------LYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRY 610

Query: 58  LEEKRVIEEEVNRL 17
                  E  +NRL
Sbjct: 611 PHLLETPENLMNRL 624


>AY973544-1|AAX84045.1|  400|Drosophila melanogaster midlife crisis
           protein.
          Length = 400

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
 Frame = -3

Query: 394 GESELSWGF--ESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 221
           G  + S+G+  +      ++G  + YG +    DV+G  ++  +  C   YT NG  LG 
Sbjct: 17  GWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCF--YTKNGVDLGI 74

Query: 220 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY---NMLSKTKIVRKRIEVPVEQV 59
           AF + P        LYP V   T       NFG E +    ++   K +R  +   +++ 
Sbjct: 75  AFRDLPTK------LYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRY 128

Query: 58  LEEKRVIEEEVNRL 17
                  E  +NRL
Sbjct: 129 PHLLETPENLMNRL 142


>AE013599-1094|AAM68758.1|  598|Drosophila melanogaster CG11763-PC,
           isoform C protein.
          Length = 598

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
 Frame = -3

Query: 394 GESELSWGF--ESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 221
           G  + S+G+  +      ++G  + YG +    DV+G  ++  +  C   YT NG  LG 
Sbjct: 137 GWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCF--YTKNGVDLGI 194

Query: 220 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY---NMLSKTKIVRKRIEVPVEQV 59
           AF + P        LYP V   T       NFG E +    ++   K +R  +   +++ 
Sbjct: 195 AFRDLPTK------LYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRY 248

Query: 58  LEEKRVIEEEVNRL 17
                  E  +NRL
Sbjct: 249 PHLLETPENLMNRL 262


>AE013599-1093|AAF58795.2|  960|Drosophila melanogaster CG11763-PA,
           isoform A protein.
          Length = 960

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
 Frame = -3

Query: 394 GESELSWGF--ESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 221
           G  + S+G+  +      ++G  + YG +    DV+G  ++  +  C   YT NG  LG 
Sbjct: 499 GWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCF--YTKNGVDLGI 556

Query: 220 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY---NMLSKTKIVRKRIEVPVEQV 59
           AF + P        LYP V   T       NFG E +    ++   K +R  +   +++ 
Sbjct: 557 AFRDLPTK------LYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRY 610

Query: 58  LEEKRVIEEEVNRL 17
                  E  +NRL
Sbjct: 611 PHLLETPENLMNRL 624


>AE013599-1092|ABC66064.1|  962|Drosophila melanogaster CG11763-PD,
           isoform D protein.
          Length = 962

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
 Frame = -3

Query: 394 GESELSWGF--ESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 221
           G  + S+G+  +      ++G  + YG +    DV+G  ++  +  C   YT NG  LG 
Sbjct: 499 GWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCF--YTKNGVDLGI 556

Query: 220 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY---NMLSKTKIVRKRIEVPVEQV 59
           AF + P        LYP V   T       NFG E +    ++   K +R  +   +++ 
Sbjct: 557 AFRDLPTK------LYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRY 610

Query: 58  LEEKRVIEEEVNRL 17
                  E  +NRL
Sbjct: 611 PHLLETPENLMNRL 624


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -3

Query: 79   EVPVEQVLEEKRVIEEEVNRLKKKKK 2
            EVP ++V+EE   I EE  RLKK KK
Sbjct: 5697 EVPQKEVIEEIEEIVEEKRRLKKTKK 5722


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
            isoform C protein.
          Length = 18074

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -3

Query: 79   EVPVEQVLEEKRVIEEEVNRLKKKKK 2
            EVP ++V+EE   I EE  RLKK KK
Sbjct: 5697 EVPQKEVIEEIEEIVEEKRRLKKTKK 5722


>BT025190-1|ABF17881.1|  166|Drosophila melanogaster IP05104p
           protein.
          Length = 166

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 13/57 (22%), Positives = 22/57 (38%)
 Frame = -2

Query: 209 PAQRAGRPHAVPARAHQEHVLQSQLRIRTLQHAVKNKNSAETH*STSRASFRRKEGH 39
           P +     HA P R HQ+     Q +++  Q     +   + H    +  FR +  H
Sbjct: 106 PTREQHHQHATPTREHQQQTPTRQQQLQREQQQQLQREQQQQHHRDRQQHFREQRDH 162


>BT022942-1|AAY55358.1|  166|Drosophila melanogaster IP08406p
           protein.
          Length = 166

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 13/57 (22%), Positives = 22/57 (38%)
 Frame = -2

Query: 209 PAQRAGRPHAVPARAHQEHVLQSQLRIRTLQHAVKNKNSAETH*STSRASFRRKEGH 39
           P +     HA P R HQ+     Q +++  Q     +   + H    +  FR +  H
Sbjct: 106 PTREQHHQHATPTREHQQQTPTRQQQLQREQQQQLQREQQQQHHRDRQQHFREQRDH 162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,331,738
Number of Sequences: 53049
Number of extensions: 591887
Number of successful extensions: 1914
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)