Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_F08
         (779 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456522-1|CAG30408.1|  931|Homo sapiens MKL1 protein.                 31   3.5  
BC115039-1|AAI15040.1|  798|Homo sapiens MKL1 protein protein.         31   3.5  
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.                30   8.1  

>CR456522-1|CAG30408.1|  931|Homo sapiens MKL1 protein.
          Length = 931

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = -3

Query: 666 NPRFHTPTTPDLTSISINPLTPX*KEFAPGLKP-PLSSEAPSAYLTPSSLGMXKGVSPP 493
           NP    P T  +   ++ P  P        L+P P    AP   L P   G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656


>BC115039-1|AAI15040.1|  798|Homo sapiens MKL1 protein protein.
          Length = 798

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = -3

Query: 666 NPRFHTPTTPDLTSISINPLTPX*KEFAPGLKP-PLSSEAPSAYLTPSSLGMXKGVSPP 493
           NP    P T  +   ++ P  P        L+P P    AP   L P   G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656


>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
          Length = 1486

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
 Frame = -3

Query: 705 PXPXXSXTSTXSSNPRFHTPTTPDLTSISINPLTPX*KEF-----APG-LKPPLSSEAPS 544
           P P    T      P+   P+  +  S+   P TP           PG LKPP+ +  P 
Sbjct: 399 PPPEVFSTGDTKKQPKLQPPSPANSGSLQ-GPQTPQSTGSNSMAEVPGDLKPPIPASTPH 457

Query: 543 AYLTPSSLGMXKGVS--PPYFQVNDESQASR 457
             +TP   G    +S   P+  V+D S   R
Sbjct: 458 GQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 488


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,959,085
Number of Sequences: 237096
Number of extensions: 2008499
Number of successful extensions: 5081
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5066
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)