Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_F02
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical pr...   134   5e-32
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass...    29   5.1  
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical
           protein K07C5.6 protein.
          Length = 647

 Score =  134 bits (325), Expect = 5e-32
 Identities = 57/134 (42%), Positives = 87/134 (64%)
 Frame = -3

Query: 544 PPKXQMXQAXYKRDRQRYKSQVKQSILEKYGGEEHLQSVPRELLLAQTEVFTRYNRDGTL 365
           P K +  +  Y++++   K++ ++ +L+KYGG EH++    ELLLAQTE +  YNR G +
Sbjct: 323 PTKLEALKKEYEKEKSTLKNETQKELLDKYGGGEHMERPADELLLAQTESYIEYNRKGKV 382

Query: 364 VSGAEKQLAKSKYEEDALINNHTTVWGSYWRDGQWGYKCCHSFIKMSYCVGEAGKTVVLP 185
           + G EK    S+++ED    NHT+V+GS+WR+G+WGYKCCH F+K SYC G+ G  +   
Sbjct: 383 IKGKEKVAISSRFKEDIYPQNHTSVFGSFWREGRWGYKCCHQFVKNSYCTGKQG--IEAE 440

Query: 184 VSDDKKLSTSTDGI 143
            S  K  +TS + I
Sbjct: 441 TSAAKGTTTSNEEI 454


>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 59 protein.
          Length = 1592

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 253 KCCHSFIKMSYCVGEAGKTVVLPVSDDKKLSTSTD 149
           +CC+S ++   C+ E  ++V   +S  KKL  S D
Sbjct: 47  ECCNSTLRKEKCIAEFVESVKTVISKAKKLRLSRD 81


>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
            F11A10.4 protein.
          Length = 1646

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -3

Query: 559  TXWPSPPKXQMXQAXYKRDRQRYKSQVKQSILE-KYGGEEHLQSVPRELLLAQTEVFTRY 383
            T WP+    Q+  A    D +   S V+Q  L  +    + LQS+P + +    E  +RY
Sbjct: 873  TSWPNV--IQIISAIIDSDTECELSLVRQGYLGLRLVSSDFLQSIPFDCISGLVEAISRY 930

Query: 382  NRDGT 368
            ++  T
Sbjct: 931  SKQNT 935


>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
            F11A10.4 protein.
          Length = 1646

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -3

Query: 559  TXWPSPPKXQMXQAXYKRDRQRYKSQVKQSILE-KYGGEEHLQSVPRELLLAQTEVFTRY 383
            T WP+    Q+  A    D +   S V+Q  L  +    + LQS+P + +    E  +RY
Sbjct: 873  TSWPNV--IQIISAIIDSDTECELSLVRQGYLGLRLVSSDFLQSIPFDCISGLVEAISRY 930

Query: 382  NRDGT 368
            ++  T
Sbjct: 931  SKQNT 935


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 444 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 346
           S++SP P S   P P  SPA+TG+  + +G  S
Sbjct: 318 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 348


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 444 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 346
           S++SP P S   P P  SPA+TG+  + +G  S
Sbjct: 525 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 555


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
           protein K06A9.1b protein.
          Length = 2232

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 444 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 346
           S++SP P S   P P  SPA+TG+  + +G  S
Sbjct: 525 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 555


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,427,279
Number of Sequences: 27780
Number of extensions: 221128
Number of successful extensions: 838
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)