Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_E16
         (771 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0145 - 12749288-12751510                                         29   3.1  
07_03_0177 - 14770777-14772045                                         28   9.5  

>09_03_0145 - 12749288-12751510
          Length = 740

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = +1

Query: 280 PXXPPXKPXXPPGXXPXPXKXXXXXXXKXPPXFXGXXXNPPXGXXXXKXPPXXXFXP 450
           P  PP  P  PPG  P P         + PP F G     P         P   F P
Sbjct: 28  PSPPPPPP--PPGIQPPPPALPGMPHGRPPPPFPGGRDAFPQAASTVVPDPARFFAP 82


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 28/107 (26%), Positives = 30/107 (28%), Gaps = 1/107 (0%)
 Frame = -1

Query: 609 GXGXXXXGGXXPKGPL-RGQKXXGXFXFXXGFFPGGGXGXXKNFXFXKKNXXXKXXEXXX 433
           G G    GG    G   +G    G F    G   GGG G      F K            
Sbjct: 108 GKGGGVGGGFGKGGGFGKGGGFGGGFGKGGGI--GGGIGHGAGGGFGKGGGLGGGIGPGI 165

Query: 432 XGGFXXXGXXGGVXXXXXKXGGXFXXXXXXXFXGXXGXXRGXXGFXG 292
            GG+   G  GG        GG F         G  G   G  G  G
Sbjct: 166 GGGYGKGGGLGGGIGKGGGLGGGFGKSGGLGGGGGLGGGGGLGGGIG 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,664,325
Number of Sequences: 37544
Number of extensions: 189889
Number of successful extensions: 248
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)