Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_E06
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 31 0.90
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 31 0.90
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 31 0.90
Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical p... 30 2.1
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 29 2.8
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 3.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 6.4
S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein. 28 6.4
M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protei... 28 6.4
AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer :... 28 6.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 28 8.4
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 28 8.4
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 31.9 bits (69), Expect = 0.52
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Frame = +2
Query: 125 RAGAQSGLLKRRDRVDTEHITSIPPSHGTPDRWPPATRPPVPSXQRAESPL*WRRVTPSP 304
R A + R + TE +IPP P PP T PP R P +T P
Sbjct: 542 RTEAPETVTTRTEPPRTEPPRTIPPRTEAPRTEPPRTEPPKTEAPRTVRPKTEAPMTVPP 601
Query: 305 RAVGG-TRSAITRLPIAGERASTPPHVWVSPRHKTGGT 415
R T + T +P+ + PP PR + T
Sbjct: 602 RTEPPMTEAPRTEVPMTEPPKTEPPRT-APPRTEVSMT 638
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +2
Query: 185 TSIPPSHGTPDRWPPATRPPVPSXQRAESP-L*WRRVTPSPRAVGGTRSAITRLPIAGER 361
T++PP P PP T PP + E P + P P T T P
Sbjct: 364 TTVPPKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEPP 423
Query: 362 ASTPPHV 382
+ PP++
Sbjct: 424 TTEPPNI 430
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/90 (25%), Positives = 29/90 (32%)
Frame = +2
Query: 77 TSLKTPAAHNRRPTSDRAGAQSGLLKRRDRVDTEHITSIPPSHGTPDRWPPATRPPVPSX 256
T + P R R A R + TE ++ P P PP T PP+
Sbjct: 551 TRTEPPRTEPPRTIPPRTEAPRTEPPRTEPPKTEAPRTVRPKTEAPMTVPPRTEPPMTEA 610
Query: 257 QRAESPL*WRRVTPSPRAVGGTRSAITRLP 346
R E P+ T PR LP
Sbjct: 611 PRTEVPMTEPPKTEPPRTAPPRTEVSMTLP 640
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 138 SRGY*NGGTGLTQSTLHPSH-RPTXRRTGGHQRHDHRFPRFSGP 266
++GY N G G + PS+ +P + GGHQ H R S P
Sbjct: 188 NKGYDNYGQGHDSESYQPSYYQPKPKYYGGHQSHYQPSARHSSP 231
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +2
Query: 26 ENRRIPTRAAGGVCGS*TSLKTPAAHNRRPTSDRAGAQSGLLKRRDRVDTEHITSIPPSH 205
E +++ T S S +TP +H+ S+ S +++ T PP
Sbjct: 120 EEKKVKTPKPPKSSSSRYSSETPTSHHHHHRSNSISHSSDVIRPSQPKAT---APPPPLV 176
Query: 206 GTPDRWPPATRPPVPSXQRAESP 274
P R +T PP P RA+SP
Sbjct: 177 PAPARATASTPPPAPPAARAQSP 199
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +2
Query: 26 ENRRIPTRAAGGVCGS*TSLKTPAAHNRRPTSDRAGAQSGLLKRRDRVDTEHITSIPPSH 205
E +++ T S S +TP +H+ S+ S +++ T PP
Sbjct: 480 EEKKVKTPKPPKSSSSRYSSETPTSHHHHHRSNSISHSSDVIRPSQPKAT---APPPPLV 536
Query: 206 GTPDRWPPATRPPVPSXQRAESP 274
P R +T PP P RA+SP
Sbjct: 537 PAPARATASTPPPAPPAARAQSP 559
>Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical
protein T06C12.14 protein.
Length = 245
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 497 GELSLTRPAASFCEMVHSQKSSIAFHDSSLPSIDATTPGSDKSGPIFATRTRRCTSQA 670
G + PAA+ C V S S + + +P+ +PG D+ P+ T T A
Sbjct: 31 GSAFVWTPAATACSNVISDSSCAVLYPAPVPADGYPSPGRDQQRPLACYTTATATPAA 88
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical protein
D2023.2 protein.
Length = 1175
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3
Query: 320 FPRPLWGKV*RGAIKAGSRPAEXREPVVVSLV 225
FP PL KV RG K RP E +PV + V
Sbjct: 955 FPEPLRTKVLRGKPKVDGRPGENAKPVDLDAV 986
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/108 (25%), Positives = 42/108 (38%)
Frame = +3
Query: 99 LTTGALPRTGPEPSRGY*NGGTGLTQSTLHPSHRPTXRRTGGHQRHDHRFPRFSGPRARF 278
+ GA+PR+GP P++G G Q+ + P T R+ H ++ + P F R
Sbjct: 237 MMNGAMPRSGPMPTQGR-PGIPPNQQAMMQP--MMTDRQFMQHGQYGQQRPEFMQQYGRP 293
Query: 279 DGAALHLPPERSGERGLPSPGFLLRVSVQARHPTSGSLPXTKRVGPLA 422
G + G P G + + HP P + GP A
Sbjct: 294 GGYPMMHQGMMMDSNGQPIRGPNQMMMMSNGHPGMSHGPPNGQPGPQA 341
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/108 (25%), Positives = 42/108 (38%)
Frame = +3
Query: 99 LTTGALPRTGPEPSRGY*NGGTGLTQSTLHPSHRPTXRRTGGHQRHDHRFPRFSGPRARF 278
+ GA+PR+GP P++G G Q+ + P T R+ H ++ + P F R
Sbjct: 237 MMNGAMPRSGPMPTQGR-PGIPPNQQAMMQP--MMTDRQFMQHGQYGQQRPEFMQQYGRP 293
Query: 279 DGAALHLPPERSGERGLPSPGFLLRVSVQARHPTSGSLPXTKRVGPLA 422
G + G P G + + HP P + GP A
Sbjct: 294 GGYPMMHQGMMMDSNGQPIRGPNQMMMMSNGHPGMSHGPPNGQPGPQA 341
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3
Query: 320 FPRPLWGKV*RGAIKAGSRPAEXREPVVVSLV 225
FP PL KV RG K RP E +PV + V
Sbjct: 955 FPEPLRTKVLRGKPKVDGRPGENAKPVDLDAV 986
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 173 TEHITSIPPSHGTPDRWPPATRPPVPSXQRAESPL*WRRVTP 298
T T++PP TP PPAT PP + ++P + TP
Sbjct: 299 TTTTTALPPCVYTPA--PPATAPPATATPATQTPRTYSTTTP 338
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 224 PPATRPPVPSXQRAESPL*WRRVTPSPRAVGGTRSAITRLPIAGERASTPP 376
PPA PP P + PL P P A G T P S PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 224 PPATRPPVPSXQRAESPL*WRRVTPSPRAVGGTRSAITRLPIAGERASTPP 376
PPA PP P + PL P P A G T P S PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 224 PPATRPPVPSXQRAESPL*WRRVTPSPRAVGGTRSAITRLPIAGERASTPP 376
PPA PP P + PL P P A G T P S PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = +2
Query: 197 PSHGTPDRWPPATRPPVPSXQ--RAESPL*WRRVTPSPRAVGGTRSAITRLPIAGERAST 370
P+ TP P A P P+ A +P TP+P V A AG A+T
Sbjct: 260 PAVETPAPAPAAEETPAPATSSEEAPAPAPTAEETPAPETVSAAPEAANSYDSAGGDAAT 319
Query: 371 PP 376
P
Sbjct: 320 AP 321
>S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +2
Query: 143 GLLKRRDRVDTEHITSIPPSHGTPDRWPPATRPPVPSXQRAESPL*WRR 289
GL R D HIT P + PPA PP+P Q+A L RR
Sbjct: 1407 GLQVPRRPYDYYHITERTPPPEDLNWVPPAESPPIPIPQQAFDLLEERR 1455
>M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protein
protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +2
Query: 143 GLLKRRDRVDTEHITSIPPSHGTPDRWPPATRPPVPSXQRAESPL*WRR 289
GL R D HIT P + PPA PP+P Q+A L RR
Sbjct: 1407 GLQVPRRPYDYYHITERTPPPEDLNWVPPAESPPIPIPQQAFDLLEERR 1455
>AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform a
protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +2
Query: 143 GLLKRRDRVDTEHITSIPPSHGTPDRWPPATRPPVPSXQRAESPL*WRR 289
GL R D HIT P + PPA PP+P Q+A L RR
Sbjct: 1407 GLQVPRRPYDYYHITERTPPPEDLNWVPPAESPPIPIPQQAFDLLEERR 1455
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 182 ITSIPPSHGTPDRWPPATRPPVPSXQRAESPL*WRRVTPSP-RAVGGTRS 328
IT IPP P PP PP P ++P VT SP ++V G RS
Sbjct: 345 ITEIPPIISPPA--PPPPPPPPPPPPPPQTPSASSSVTFSPTKSVDGGRS 392
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 188 SIPPSHGTPDRWPPATRPPVPSXQRAESPL*WRRVTPSP 304
S PP P PP ++PPV ++ P+ +TP P
Sbjct: 478 SQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPPP 516
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 188 SIPPSHGTPDRWPPATRPPVPSXQRAESPL*WRRVTPSP 304
S PP P PP ++PPV ++ P+ +TP P
Sbjct: 542 SQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPPP 580
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 194 PPSHGTPDRWPP--ATRPPVPSXQRAESPL*WRRVTPSPRA 310
P +G+P +WPP T PP R P TP P A
Sbjct: 401 PQVNGSPKKWPPVGTTSPPREPVNRLTEPDEPSTYTPKPIA 441
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +2
Query: 92 PAAHNRRPTSDRAGAQSGLLKRRDRVDTEHITSIPPSHGTPDRWPPATRPPVPSXQRAES 271
P+ R + +S RRDR D+++ S D PP RP P+ +R +
Sbjct: 163 PSRKIREESPSARNRRSPPRTRRDRHDSDNSPPRNRSRRDSDNSPPRRRPSSPARRRKDD 222
Query: 272 PL 277
L
Sbjct: 223 DL 224
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 83 LKTPAAHNRRPTSDRAGAQSGLLKRRDRVDTEHITSIPPSHG-TPDRWPPATRPPVPSXQ 259
L+ A RP+ +R G G +RR R S S +P R TR P PS
Sbjct: 90 LRVTLAKYDRPSDERGGRGGGGGRRRSRSPRRRSRSPRYSRSRSPRRSRSRTRSP-PSRD 148
Query: 260 RAESP 274
R +SP
Sbjct: 149 RRDSP 153
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 567 PSMTHRCQASMPRRQAATSQVLSLRPGHGAAPPKRG 674
P+ HR Q P QAA S ++P HG APP G
Sbjct: 115 PAAHHRQQMMPP--QAAPSPGGPMQPPHGFAPPPMG 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,483,575
Number of Sequences: 27780
Number of extensions: 423323
Number of successful extensions: 1503
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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