Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_E04
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284...    31   1.0  
04_04_1518 - 34129542-34130001,34130567-34130652                       28   9.4  

>04_04_0465 +
           25427065-25427113,25428099-25428227,25428387-25428479,
           25428681-25428953,25429037-25429288,25429735-25430118,
           25430243-25430483,25431986-25432736
          Length = 723

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = -3

Query: 715 SPIPYTNHPXX*HPFPSIP*RRXRKEFAPGLKPPLSSE 602
           +P P T+ P   HP P     R R   AP L PP SSE
Sbjct: 53  APAPETHRPGIRHPVPRH--HRKRPHVAPPLPPPSSSE 88


>04_04_1518 - 34129542-34130001,34130567-34130652
          Length = 181

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 715 SPIPYTNHPXX*HPFPSIP*RRXRK--EFAPGLKPPLSSEAPSXYLTPSSLG 566
           SP P  +HP    P  SIP R   +      GL PP S+ +PS  L+ + LG
Sbjct: 106 SPSPRRHHPHQASPLVSIPTRPPCRIPHRGQGL-PPASTTSPSPSLSLNPLG 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,485,304
Number of Sequences: 37544
Number of extensions: 274934
Number of successful extensions: 487
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)