Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_D22
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical ...    33   0.30 
U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical
           protein T05E7.1 protein.
          Length = 474

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = -3

Query: 571 KPPLSSEAPSAYLTPSSLGMXKRGFAPLFSSE**ITSFAPY*WSFHAYSAPLLQLTPSL 395
           KPP     P+    P S GM + G+A + +SE     F  + +++ AY   L +L P +
Sbjct: 182 KPPGKGPFPAVIFIPGSNGMLESGYAAVLASE----GFLTFTFAYFAYKKDLPKLIPDV 236


>U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical
           protein F08F8.9c protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 483 ENKGAKPLLXMPSDEGVR-YADGASDD-NGGFNPGAN 587
           +NK AKPL+ +  DE  R +     +D NGGF+  +N
Sbjct: 187 KNKNAKPLMDIKFDEKARSFKQRTGEDYNGGFDISSN 223


>U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical
           protein F08F8.9a protein.
          Length = 626

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 483 ENKGAKPLLXMPSDEGVR-YADGASDD-NGGFNPGAN 587
           +NK AKPL+ +  DE  R +     +D NGGF+  +N
Sbjct: 187 KNKNAKPLMDIKFDEKARSFKQRTGEDYNGGFDISSN 223


>U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical
           protein F08F8.9b protein.
          Length = 624

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 483 ENKGAKPLLXMPSDEGVR-YADGASDD-NGGFNPGAN 587
           +NK AKPL+ +  DE  R +     +D NGGF+  +N
Sbjct: 187 KNKNAKPLMDIKFDEKARSFKQRTGEDYNGGFDISSN 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,733,757
Number of Sequences: 27780
Number of extensions: 314218
Number of successful extensions: 952
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)